Abstract
Here, we report the annotated genome sequences of two Shewanella sp. strains isolated from textile industry wastewater effluent in Peru. Potential genes for encoding enzymes that enable the strain to decolorize and degrade textile azo dyes were detected in both genomes.
Highlights
We report the annotated genome sequences of two Shewanella sp. strains isolated from textile industry wastewater effluent in Peru
Preliminary gene prediction and annotation were performed with the Prokka tool and the NCBI Prokaryotic Genome Annotation Pipeline (PGAP), which uses BLASTp alignments, removing those below thresholds of identity of 25% and coverage of 70% [9, 10]
The 16S rRNA sequences were compared to the NCBI 16S rRNA database via BLASTN, identifying the best hit to Shewanella sp
Summary
We report the annotated genome sequences of two Shewanella sp. strains isolated from textile industry wastewater effluent in Peru. No of reads Read length (bp) Genome size (bp) No of contigs N50 length (bp) GϩC content (%) No of protein-coding genes No of tRNA genes No of rRNA genes PRJNA547647 VFSK00000000 SRX6756866 24,762,742 101 5,343,011 134 69,978 46.21 4,924 93 24 by using the careful option and increasing k-mer values from 31 to 71 [5].
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