Abstract
ABSTRACTEscherichia coli C20, isolated from domestic chicken gut microbiota, demonstrated multidrug resistance to the tested antibiotics. Here, we present the draft genomic sequences of E. coli C20, along with that of its plasmid. The final assembly yielded a chromosome of 4,640,940 bp and plasmid of 277,380 bp, with average coverages of 146.95-fold and 35.63-fold, respectively.
Highlights
Escherichia coli C20, isolated from domestic chicken gut microbiota, demonstrated multidrug resistance to the tested antibiotics
The chromosome and plasmid contigs were separately aligned with the complete genome of E. coli K-12 substrain MG1655
Functional annotation of final genomic sequences was carried out using RAST [9], and phylogenomic analyses were carried out using the core genomic data from 39 E. coli-related genomes produced in MicroScope, according to the methods described by Ma et al [10]
Summary
Escherichia coli C20, isolated from domestic chicken gut microbiota, demonstrated multidrug resistance to the tested antibiotics. Escherichia coli strain C20, isolated from domestic chicken gut microbiota, demonstrated resistance to 7 of 10 tested antibiotics [6]. The contigs were divided into chromosome and plasmid parts, according to coverage. The chromosome and plasmid contigs were separately aligned with the complete genome of E. coli K-12 substrain MG1655
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