Abstract
ABSTRACTWe report the draft genome sequence of Vibrio chagasii strain 18LP, isolated from gilthead seabream larvae at a fish hatchery research station in Portugal. The genome presents numerous features underlying opportunistic behavior, including genes coding for toxin biosynthesis and tolerance, host cell invasion, and heavy metal resistance.
Highlights
Vibrio spp. are ubiquitous in the marine environment and may cause disease outbreaks, leading to high economic losses in aquaculture [1, 2]
The read quality was enhanced by trimming the low-quality bases using the “Trim sequences” option in CLC Genomics Workbench v7.0.4
The sequence reads were assembled into 49 contigs with the “de novo assembly” option within CLC Genomics Workbench v7.0.4
Summary
Vibrio spp. are ubiquitous in the marine environment and may cause disease outbreaks, leading to high economic losses in aquaculture [1, 2]. A genome library was constructed using the Illumina Nextera XT DNA library preparation kit (insert length, 450 bp). Paired-end sequencing was conducted on the Illumina HiSeq 2500 platform at BaseClear (The Netherlands). FASTQ sequence files were generated using the Illumina Casava v1.8.3 pipeline.
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