Abstract
We report the draft genome sequence of Variovorax boronicumulans strain HAB-30, which was isolated from a phenol-degrading chemostat culture. This strain contains genes encoding a multicomponent type of phenol hydroxylase, with degradation pathways for catechol and other aromatic compounds. The genome sequence will be useful for understanding the metabolic pathways involved in phenol degradation.
Highlights
We report the draft genome sequence of Variovorax boronicumulans strain HAB-30, which was isolated from a phenol-degrading chemostat culture
Annotation/reannotation of genome sequences was performed for prediction of open reading frames, rRNA genes, and tRNA genes with the DDBJ Fast Annotation and Submission Tool (DFAST-core standalone program version 1.2.0) [9]
The biodegradation of aromatic compounds leads to the formation of catechol or its derivatives, which are transformed into tricarboxylic acid cycle intermediates via ortho- or meta-cleavage pathways [12, 13]
Summary
We report the draft genome sequence of Variovorax boronicumulans strain HAB-30, which was isolated from a phenol-degrading chemostat culture. Annotation/reannotation of genome sequences was performed for prediction of open reading frames, rRNA genes, and tRNA genes with the DDBJ Fast Annotation and Submission Tool (DFAST-core standalone program version 1.2.0) [9]. Coding regions and 60 tRNAs were predicted and annotated.
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