Abstract
We describe the draft genome of a bovine enterovirus (EV) isolate recovered from sewage in Nigeria. This isolate replicates on both RD and L20B cell lines but is negative for all EV screens in use by the Global Poliovirus Eradication Initiative (GPEI). It contains 7,368 nucleotides (nt) with 50.2% G+C content and an open reading frame (ORF) with 6,525 nt (2,174 amino acids).
Highlights
We describe the draft genome of a bovine enterovirus (EV) isolate recovered from sewage in Nigeria
The open reading frame (ORF) encodes 1 polyprotein that can be cleaved into 3 (P1 [2,517 nt, 839 aa], P2 [1,737 nt, 579 aa], and P3 [2,271 nt, 756 aa]) and subsequently into the 11 proteins encoded in EV genomes
Search of the draft genome against the GenBank database showed it to be most closely related to strain BEV IS1/Bos taurus/JPN/1990 (GenBank accession number LC150009)
Summary
We describe the draft genome of a bovine enterovirus (EV) isolate recovered from sewage in Nigeria. The draft genome is 7,368 nucleotides (nt) long, with a GϩC content of 50.2%, and was assembled from 6,862 (0.09%) reads.
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