DNA replication in dnaB mutants of Escherichia coli: Gene product interaction and synthesis of 4 S pieces

Abstract

The DNA produced by several dnaB mutants has been examined both in vivo and in vitro. The alleles chosen for study had previously been shown to differ over a wide range in the apparent severity of their effects on DNA replication. Comparison of DNA replication between dnaB heteroallelic diploids and the constituent haploid strains indicates interaction between the dnaB products in the heteroallelic diploids. The data are consistent with a functional multimeric aggregate of dnaB gene products that is at least a tetramer. Alkaline sucrose gradient profiles of pulse-labeled DNA, synthesized by some of the mutants in vivo and by mutant lysates in vitro, exhibit a peak at about 4 S. The 4 S DNA is most apparent in those mutants in which replication is most severely restricted by temperature. This 4 S material can be chased in vitro into DNA larger than Okazaki pieces, and density transfer experiments indicate that these pieces are formed at the replication fork. Conversion of the 4 S material to large DNA is not altered by inhibition of polynucleotide ligase either by the presence of the lig-4 polA1 mutations in vivo or by the addition of nicotinamide mononucleotide in vitro. The in vitro observations suggest that 4 S pieces are formed on only one side of the replication fork.