Abstract

The use and dispersal of domesticated plants may reflect patterns of early human diffusion of technologies and lifestyles. Treegourd (Crescentia cujete) has fruits with ancient utilitarian and symbolic value in the Neotropics. We assessed diversity based on chloroplast (SNPs), nuclear (SSR) markers, and fruit shapes of cultivated treegourds and wild relatives across Amazonia and Mesoamerica in order to discuss hypothesis of dispersal routes and diversification of fruits along its distribution. The haplotype network showed three distinct groups: Crescentia amazonica, wild Mesoamerican C. cujete, and cultivated C. cujete from Brazilian Amazonia and Mexico. Mexico and Brazil shared two haplotypes, with slightly different distributions in Amazonia. The most divergent haplotype is well-represented in Eastern Amazonia. Nuclear differentiation between Mesoamerican wild and cultivated C. cujete is relatively low (FST = 0.35), compared with Amazonian cultivated (FST = 0.45–0.61). Differentiation is also higher between wild C. amazonica and cultivated C. cujete (FST = 0.57), but modest within cultivated C. cujete from Amazonia and Mexico (FST = 0.04), with higher genetic similarity in northwestern Amazonia. Mexico and Amazonia showed similar chloroplast nucleotide diversity (4.66 × 10−2 and 5.31 × 10−2 , respectively), although sample sizes are very different. Except in Northwestern and Eastern Amazonia, we found ample genetic homogeneity of cultivated C. cujete across Amazonia, but highest morphological diversity in the Northwest, with fruit shapes that are absent in Mexico. We conclude that treegourds introduced into the Amazon Basin and Mexico share a common ancestry with a currently unknown origin. The patterns of genetic diversity across Amazonia allow two hypotheses of the routes of introduction: a northwestern introduction into the Negro and Solimoes Rivers, and an eastern introduction from the coastal Guianas into the Amazonas River. The dispersal into Amazonia followed previously proposed routes of human and plant migrations. The contrasting fruit shape diversity suggests different utilitarian demands and cultural preferences for treegourd fruits between Mexico and Amazonia.

Highlights

  • Introduction and Dispersal of TreegourdINTRODUCTIONThe use and dispersal of domesticated plants may reflect the patterns of diffusion of human technologies and lifestyles since prehistoric times (Bellwood, 2005; Blench, 2012)

  • In the Principal Component Analysis (PCA), the first two principal components explained 16.7% of the total variance found in the dataset (Figure 2B)

  • Principal component one separated wild from cultivated samples, while principal component two separated the Brazilian wild C. amazonica from the Mesoamerican wild C. cujete samples

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Summary

Introduction

The use and dispersal of domesticated plants may reflect the patterns of diffusion of human technologies and lifestyles since prehistoric times (Bellwood, 2005; Blench, 2012). Few studies have demonstrated the genetic signatures of the plants’ geographical dispersal mediated by humans in Amazonia (Clement et al, 2010; Shepard and Ramirez, 2011; Thomas et al, 2012; Freitas and Bustamante, 2013), even though they are persistent markers of the long-term use and management of resources (Hanotte et al, 2002; Parker et al, 2010; Armstrong et al, 2017). Nuclear genetic diversity of C. cujete [allelic richness (Ar), private alleles (Ap), observed heterozygosity (Ho), expected heterozygosity (Hs)] was estimated for the five Amazonian rivers considered and the Mexican samples using hierfstat (Goudet, 2005) and poppr (Kamvar et al, 2014) R packages.

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