Abstract

Although extraintestinal pathogenic Escherichia coli (ExPEC) are designated by their isolation site and grouped based on the type of host and the disease they cause, most diarrheagenic E. coli (DEC) are subdivided into several pathotypes based on the presence of specific virulence traits directly related to disease development. This scenario of a well-categorized E. coli collapsed after the German outbreak of 2011, caused by one strain bearing the virulence factors of two different DEC pathotypes (enteroaggregative E. coli and Shiga toxin-producing E. coli). Since the outbreak, many studies have shown that this phenomenon is more frequent than previously realized. Therefore, the terms hybrid- and hetero-pathogenic E. coli have been coined to describe new combinations of virulence factors among the classic E. coli pathotypes. In this review, we provide an overview of these classifications and highlight the E. coli genomic plasticity that results in some mixed E. coli pathotypes displaying novel pathogenic strategies, which lead to a new symptomatology related to E. coli diseases. In addition, as the capacity for genome interrogation has grown in the last few years, it is clear that genes encoding some virulence factors, such as Shiga toxin, are found among different E. coli pathotypes to which they have not traditionally been associated, perhaps foreshowing their emergence in new and severe outbreaks caused by such hybrid strains. Therefore, further studies regarding hetero-pathogenic and hybrid-pathogenic E. coli isolates are necessary to better understand and control the spread of these pathogens.

Highlights

  • Escherichia coli is a gram-negative, facultative anaerobic rod, which produces catalase but not oxidase

  • Strains capable of causing diseases in the human intestinal tract are designated as diarrheagenic E. coli (DEC), which is subclassified into seven different pathotypes: enterotoxigenic E. coli (ETEC), enteroinvasive E. coli (EIEC), enteroaggregative E. coli (EAEC), and enteropathogenic E. coli (EPEC), both sub-grouped in typical and atypical Shiga toxinproducing E. coli (STEC), diffusely adherent E. coli (DAEC), and adherent-invasive E. coli (AIEC) (Kaper et al, 2004; Croxen et al, 2013; Leimbach et al, 2013; Gomes et al, 2016)

  • Except for AIEC and DAEC, the differences among most of these pathotypes are typically due to specific virulence encoding genes that are directly related to the development of the disease and host symptomatology and are used for diagnostic purposes (Table 1)

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Summary

Introduction

Escherichia coli is a gram-negative, facultative anaerobic rod, which produces catalase but not oxidase. BThe classification of DAEC and AIEC was not based on the presence of specific virulence factors; it is not possible to identify the hybrid/hetero-pathogenic strains of these pathotypes.

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