Abstract

Crizotinib is an anticancer drug used for the treatment of non-small cell lung cancer. Evidences available suggest that there is a development of an acquired resistance against crizotinib action due to the emergence of several mutations in the ALK gene. It is therefore necessary to develop potent anti-cancer drugs for the treatment of crizotinib resistance non-small cell lung cancer types. In the present study, a novel class of lead molecule was identified using virtual screening, molecular docking and molecular dynamic approach. The virtual screening analysis was done using PubChem database by employing crizotinib as query and the data reduction was carried out by using molecular docking techniques. The bioavailability of the lead compounds was examined with the help of Lipinski rule of five. The screened lead molecules were analyzed for toxicity profiles, drug-likeness and other physico-chemical properties of drugs by OSIRIS program. Finally, molecular dynamics simulation was also performed to validate the binding property of the lead compound. Our analysis clearly indicates that CID 11562217, a nitrile containing compound (pyrazole-substituted aminoheteroaryl), could be the potential ALK inhibitor certainly helpful to overcome the drug resistance in non-small cell lung cancer.

Highlights

  • Lung cancer is the prominent cause of cancer deaths in the world and a global issue to be addressed (Siegel et al 2012)

  • Our analysis clearly indicates that CID 11562217, a nitrile containing compound, could be the potential anaplastic lymphoma kinase (ALK) inhibitor certainly helpful to overcome the drug resistance in non-small cell lung cancer

  • We have addressed the crizotinib resistance in non-small cell lung cancer (NSCLC) with the help of virtual screening approach

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Summary

Introduction

Lung cancer is the prominent cause of cancer deaths in the world and a global issue to be addressed (Siegel et al 2012). Chromosomal rearrangements in the anaplastic lymphoma kinase (ALK) gene that codes for anaplastic lymphoma kinase has been identified as one of the causes of NSCLC. Chromosomal rearrangements involving the ALK gene occur in different malignant conditions, including anaplastic large cell lymphoma (ALCL) and inflammatory myofibroblastic tumor (IMT) (Chiarle et al 2008). These rearrangements lead to the expression of ALK fusion genes. The new protein contains the tyrosine kinase domain of ALK and the coiled coil domain of EML4. The coiled coil domain of EML4 allows this protein to bind with other ALK fusion proteins and form dimerised and activated fusion proteins (Katayama et al 2012). An inversion in the chromosome 2 brings together the 50 end of the EML4 gene and the 30 end of the ALK gene resulting in the

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