Abstract
Spike-related traits such as spike length (Sl), fertile spikelet number (Fsn), sterile spikelet number (Ssn), grain number per spike (Gns), and thousand-kernel weight (Tkw) are important factors influencing wheat yield. However, reliably stable markers that can be used for molecular breeding in different environments have not yet been identified. In this study, a double haploid (DH) population was used for quantitative trait locus (QTL) mapping of five spike-related traits under four different nitrogen (N) supply dates in two locations and years. Seventy additive QTLs with phenotypic variation ranging from 4.12 to 34.74% and 10 major epistatic QTLs were identified. Eight important chromosomal regions on five chromosomes (1B, 2B, 2D, 5D, and 6A) were found. Sixteen stable QTLs were detected for which N application had little effect. Among those stable QTLs, QSl.sdau-2D-1, and QSl.sdau-2D-2, with phenotypic variation explained (PVE) of 10.4 and 24.2%, respectively, were flanked by markers Xwmc112 and Xcfd53 in the same order. The QTLs QSsn.sdau-2B-1, QFsn.sdau-2B-1, and QGns.sdau-2B, with PVE ranging from 4.37 to 28.43%, collocated in the Xwmc179-Xbarc373 marker interval. The consistent kernel wheat QTL (QTkw.sdau-6A) on the long arm of chromosome 6A, flanked by SSR markers Xbarc1055 and Xwmc553, showed PVE of 5.87–15.18%. Among these stable QTLs, the two flanking markers Xwmc112 and Xcfd53 have been validated using different varieties and populations for selecting Sl. Therefore, these results will be of great value for marker-assisted selection (MAS) in breeding programs and will accelerate the understanding of the genetic relationships among spike-related traits at the molecular level.
Highlights
Wheat is one of the most important crops in the world and is critical in supporting the global population (Gupta et al, 2010)
The objective of this study was to identify stable molecular markers for these traits that could be used in marker-assisted selection (MAS) by performing quantitative trait locus (QTL) mapping of wheat lines subjected to nitrogen (N) treatment at different development stages
A population of 168 double haploid (DH) wheat lines derived from a cross of elite cultivars Huapei 3 and Yumai 57 was used for QTL mapping
Summary
Wheat is one of the most important crops in the world and is critical in supporting the global population (Gupta et al, 2010). Breeders typically increase wheat yield by altering the spike number per hectare, grain number per ear, or thousand-grain weight (Ma et al, 2007; Cui et al, 2012). Important traits related to yield are spike length (Sl), fertile spikelet number (Fsn), sterile spikelet number (Ssn), grain number per spike (Gns), and thousand-kernel weight (Tkw) (Liu et al, 2016). The other four traits are direct factors affecting wheat yield; as important breeding targets, they are consistently a focus of research. With the development of molecular markers, much research has been performed on constructing genetic maps and quantitative trait locus (QTL) mapping of wheat traits related to yield (Börner et al, 2002; Huang et al, 2006; Marza et al, 2006; Kumar et al, 2007; Li et al, 2007; Ma et al, 2007; Chu et al, 2008; Sun et al, 2009; Wang et al, 2009, 2011; Zhang et al, 2009b; Tsilo et al, 2010; Ding et al, 2011; Lu et al, 2011; Cui et al, 2012; Yang et al, 2012; Wu et al, 2014; Liu et al, 2016) that have been found to be controlled by polygenes and are quantitative in nature
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