Abstract

The distinctive properties of graphene, characterized by its high carrier mobility and biocompatibility, have stimulated extreme scientific interest as a promising nanomaterial for future nanoelectronic applications. In particular, graphene-based transistors have been developed rapidly and are considered as an option for DNA sensing applications. Recent findings in the field of DNA biosensors have led to a renewed interest in the identification of genetic risk factors associated with complex human diseases for diagnosis of cancers or hereditary diseases. In this paper, an analytical model of graphene-based solution gated field effect transistors (SGFET) is proposed to constitute an important step towards development of DNA biosensors with high sensitivity and selectivity. Inspired by this fact, a novel strategy for a DNA sensor model with capability of single-nucleotide polymorphism detection is proposed and extensively explained. First of all, graphene-based DNA sensor model is optimized using particle swarm optimization algorithm. Based on the sensing mechanism of DNA sensors, detective parameters (Ids and Vgmin) are suggested to facilitate the decision making process. Finally, the behaviour of graphene-based SGFET is predicted in the presence of single-nucleotide polymorphism with an accuracy of more than 98% which guarantees the reliability of the optimized model for any application of the graphene-based DNA sensor. It is expected to achieve the rapid, quick and economical detection of DNA hybridization which could speed up the realization of the next generation of the homecare sensor system.

Highlights

  • With the discovery of graphene, a single atomic layer of graphite, material science has been experiencing a new path in biomedical applications, due to its fascinating properties [1]

  • Results of optimization for DNA sensor model The parameters to be optimized in this model were A, B and C in Equation 2 which create a solution space of four dimensions with three variables and one function known as fitness function

  • The detection of DNA hybridization is currently an area of intense interest whereas recent studies have proved that the mutations of genes are responsible for numerous inherited human disorders

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Summary

Introduction

With the discovery of graphene, a single atomic layer of graphite, material science has been experiencing a new path in biomedical applications, due to its fascinating properties [1]. There are different configurations of DNA sensors such as electrolyte-silicon (ES) structures, depletion and enhancement-mode field effect transistor (FET), with or without a reference electrode [1,12,13,14,15,16,17,18,19,20]. The focus of this theoretical study will be on developing the DNA sensor-based graphene nanomaterials which have become extremely important for diagnosis and treatment of the gene-related diseases [21,22]. The DNA sensors were exposed to a phosphate buffer solution (PBS) containing the DNA molecules

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