Abstract

Pichia pastoris is a prominent host for recombinant protein production, amongst other things due to its capability of glycosylation. However, N-linked glycans on recombinant proteins get hypermannosylated, causing problems in subsequent unit operations and medical applications. Hypermannosylation is triggered by an α-1,6-mannosyltransferase called OCH1. In a recent study, we knocked out OCH1 in a recombinant P. pastoris CBS7435 MutS strain (Δoch1) expressing the biopharmaceutically relevant enzyme horseradish peroxidase. We characterized the strain in the controlled environment of a bioreactor in dynamic batch cultivations and identified the strain to be physiologically impaired. We faced cell cluster formation, cell lysis and uncontrollable foam formation.In the present study, we investigated the effects of the 3 process parameters temperature, pH and dissolved oxygen concentration on 1) cell physiology, 2) cell morphology, 3) cell lysis, 4) productivity and 5) product purity of the recombinant Δoch1 strain in a multivariate manner. Cultivation at 30°C resulted in low specific methanol uptake during adaptation and the risk of methanol accumulation during cultivation. Cell cluster formation was a function of the C-source rather than process parameters and went along with cell lysis. In terms of productivity and product purity a temperature of 20°C was highly beneficial. In summary, we determined cultivation conditions for a recombinant P. pastoris Δoch1 strain allowing high productivity and product purity.Electronic supplementary materialThe online version of this article (doi:10.1186/s12934-014-0183-3) contains supplementary material, which is available to authorized users.

Highlights

  • The methylotrophic yeast Pichia pastoris is an attractive host for the recombinant production of proteins and biopharmaceuticals (e.g. [1,2,3])

  • We investigated the effects of the 3 process parameters temperature, pH and dissolved oxygen concentration on 1) cell physiology, 2) cell morphology, 3) cell lysis, 4) productivity and 5) product purity in a multivariate manner to identify fed-batch operating conditions for the recombinant Δoch1 strain which give both high productivity and product purity, and hamper methanol accumulation as well as cell lysis and consequent foam formation

  • The peptide mixture was analysed using a Dionex Ultimate 3000 system directly linked to a QTOF instrument equipped with the Results and discussion In the present study we developed a fed-batch bioprocess for a recombinant P. pastoris Δoch1 strain

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Summary

Introduction

The methylotrophic yeast Pichia pastoris is an attractive host for the recombinant production of proteins and biopharmaceuticals (e.g. [1,2,3]). The methylotrophic yeast Pichia pastoris is an attractive host for the recombinant production of proteins and biopharmaceuticals Due to the capacity of performing posttranslational modifications, like glycosylation, P. pastoris is attractive for the production of eukaryotic proteins The Δoch strain produced the recombinant protein with shorter glycans of considerably increased homogeneity, the strain was physiologically impaired and hard to cultivate. We investigated the effects of the 3 process parameters temperature, pH and dissolved oxygen concentration (dO2) on 1) cell physiology, 2) cell morphology, 3) cell lysis, 4) productivity and 5) product purity in a multivariate manner to identify fed-batch operating conditions for the recombinant Δoch strain which give both high productivity and product purity, and hamper methanol accumulation as well as cell lysis and consequent foam formation

Material and methods
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