Abstract

BackgroundKidney graft failure risk prediction models assist evidence-based medical decision-making in clinical practice. Our objective was to develop and validate statistical and machine learning predictive models to predict death-censored graft failure following deceased donor kidney transplant, using time-to-event (survival) data in a large national dataset from Australia.MethodsData included donor and recipient characteristics (n = 98) of 7,365 deceased donor transplants from January 1st, 2007 to December 31st, 2017 conducted in Australia. Seven variable selection methods were used to identify the most important independent variables included in the model. Predictive models were developed using: survival tree, random survival forest, survival support vector machine and Cox proportional regression. The models were trained using 70% of the data and validated using the rest of the data (30%). The model with best discriminatory power, assessed using concordance index (C-index) was chosen as the best model.ResultsTwo models, developed using cox regression and random survival forest, had the highest C-index (0.67) in discriminating death-censored graft failure. The best fitting Cox model used seven independent variables and showed moderate level of prediction accuracy (calibration).ConclusionThis index displays sufficient robustness to be used in pre-transplant decision making and may perform better than currently available tools.

Highlights

  • Kidney transplant offers better quality of life and superior survival compared to other kidney replacement therapy modalities [1]

  • The total study sample had 7,365 deceased donor kidney transplants performed from January 1­st, 2007, to December ­31st, 2017

  • Expert opinion reduced the independent variables to 40 variables, while elastic net reduced it to 46 variables

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Summary

Introduction

Kidney transplant offers better quality of life and superior survival compared to other kidney replacement therapy modalities [1]. There are several kidney graft risk prediction models in the literature that have assisted evidence-based medical decision-making in clinical practice [3, 4]. The Kidney Donor Risk Index (KDRI) developed by Rao et al in 2009 has widespread uptake in clinical decision making [3], Senanayake et al BMC Med Res Methodol (2021) 21:127 and is used in the US Kidney Allocation System [5]. Novel approaches based on statistics or machine learning methods have the potential to yield more accurate predictions [6]. Kidney graft failure risk prediction models assist evidence-based medical decision-making in clinical practice. Our objective was to develop and validate statistical and machine learning predictive models to predict death-censored graft failure following deceased donor kidney transplant, using time-to-event (survival) data in a large national dataset from Australia

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