Abstract

BackgroundComputer-based analysis of digitalized histological images has been gaining increasing attention, due to their extensive use in research and routine practice. The article aims to contribute towards the description and retrieval of histological images by employing a structural method using graphs. Due to their expressive ability, graphs are considered as a powerful and versatile representation formalism and have obtained a growing consideration especially by the image processing and computer vision community.MethodsThe article describes a novel method for determining similarity between histological images through graph-theoretic description and matching, for the purpose of content-based retrieval. A higher order (region-based) graph-based representation of breast biopsy images has been attained and a tree-search based inexact graph matching technique has been employed that facilitates the automatic retrieval of images structurally similar to a given image from large databases.ResultsThe results obtained and evaluation performed demonstrate the effectiveness and superiority of graph-based image retrieval over a common histogram-based technique. The employed graph matching complexity has been reduced compared to the state-of-the-art optimal inexact matching methods by applying a pre-requisite criterion for matching of nodes and a sophisticated design of the estimation function, especially the prognosis function.ConclusionThe proposed method is suitable for the retrieval of similar histological images, as suggested by the experimental and evaluation results obtained in the study. It is intended for the use in Content Based Image Retrieval (CBIR)-requiring applications in the areas of medical diagnostics and research, and can also be generalized for retrieval of different types of complex images.Virtual SlidesThe virtual slide(s) for this article can be found here: http://www.diagnosticpathology.diagnomx.eu/vs/1224798882787923.

Highlights

  • Computer-based analysis of digitalized histological images has been gaining increasing attention, due to their extensive use in research and routine practice

  • Dataset The data used for this work consists of histological images provided by The Charite Hospital, Berlin

  • The Whole Slide Images (WSI) images are produced by a Zeiss MIRAX SCAN WSI scanner

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Summary

Introduction

Computer-based analysis of digitalized histological images has been gaining increasing attention, due to their extensive use in research and routine practice. The article aims to contribute towards the description and retrieval of histological images by employing a structural method using graphs. Due to their expressive ability, graphs are considered as a powerful and versatile representation formalism and have obtained a growing consideration especially by the image processing and computer vision community. Histological image analysis can contribute towards diagnosis and treatment planning, study and research work. Clinical pathology is expected to benefit from such a system where visually interesting regions containing similar tissue structures can be selected and retrieved from existing large databases for further studies. The work has been performed keeping in mind the generic nature of medical images as well as the specific nature of the histological data to be analysed, by exploiting the representational power of graphs to describe such complex images efficiently

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