Abstract

p38alpha and p38beta MAPKs (mitogen-activated protein kinases) share about 80% of their protein sequence identity, but have quite different biological functions. One such difference is in regulating the subcellular localization of their downstream kinases, such as PRAK (p38-regulated/activated protein kinase or MK5). The p38alpha-PRAK complex is found in the nucleus, whereas the p38beta-PRAK complex is exclusively localized to the cytosol. By generating a series of chimeric and point mutants of p38alpha and p38beta, we found two amino acid residues (Asp(145) and Leu(156) in p38alpha, Gly(145) and Val(156) in p38beta) that determine the distinct subcellular locations of p38alpha-PRAK and p38beta-PRAK. The subcellular localization of MK2 (MAPK-activated protein kinase 2), another downstream kinase of p38, was regulated in the same manner as that of PRAK. We found that nuclear import, but not export, determines the subcellular localization of p38alpha-PRAK and p38beta-PRAK. The published structure of the p38alpha-MK2 complex suggests Leu(156) of p38alpha is involved in the interaction with the nuclear localization signal in PRAK. The difference at this residue between p38alpha and p38beta may affect the nuclear localization signal in PRAK differently, and thereby influence the import of the complexes. Asp(145) in p38alpha (or Gly(145) in p38beta) is located on a different surface patch, and further random mutagenesis revealed that mutation of Asp(145), Thr(123), and Gln(325), the residues that can directly interact with importin alpha as predicted by modeling, but not mutation of the other 7 amino acid residues that cannot reach importin alpha, re-locate p38alpha-PRAK to the cytosol, suggesting that interaction with import machinery is involved in determining the subcellular localization of the p38alpha-PRAK and p38beta-PRAK complexes. Last, we show that nuclear localization of PRAK is required for its role in inhibiting the proliferation of NIH3T3 cells. In conclusion, multiple determinants control the distinct subcellular localization of p38alpha-PRAK and p38beta-PRAK complexes, and the location of PRAK plays a role in its function.

Highlights

  • The physical location of a protein is essential for its biological function in eukaryotic cells, in which many proteins traffic continuously, whereas others selectively localize to different subcellular compartments

  • We show that the subcellular location of p38␣-PRAK and p38␤-PRAK is determined by whether they can be imported into the nucleus, and we found that both the Asp145 and Leu156 in p38␣ are required for p38␣-PRAK importation into nucleus

  • As controls in this study, ectopically expressed GFP-PRAK alone in NIH3T3 cells was found in the nucleus under a fluorescent microscope (Fig. 1A); FLAG-tagged p38␣ and p38␤ are generally diffused in the cells with some preference for FLAGp38␣ in the nucleus and FLAG-p38␤ in the cytosol (Fig. 1A)

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Summary

Determinants That Control Subcellular Localization

As PRAK, via an unknown mechanism [12]. PRAK is a chaperon of p38␣ and p38␤, and a substrate of the p38 group kinases that can inhibit Ras-mediated cell proliferation [18, 19]. The complex of p38␤ and PRAK results in cytosol localization. It is unclear how these two highly homologous proteins can so dramatically localize PRAK to the different subcellular compartments. To shed light on the mechanism by which p38␣ and p38␤ differently regulate localization of PRAK, we produced a series of chimeric proteins of p38␣ and p38␤, as well as their point mutants. Data from the mutagenesis experiments and modeling implicate the involvement of Asp145 in the interaction of the p38␣-PRAK complex with importin ␣. We found that PRAK-mediated inhibition of NIH3T3 cell growth is dependent on its nuclear localization, highlighting the importance of the location of PRAK on its biological function

EXPERIMENTAL PROCEDURES
RESULTS
Located on Two Different Surface
Our previous work showed that
Proteins containing typical NLS and NES mediate their nuclear
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