Abstract

Conventional methods for detecting seed-borne fungi are laborious and time-consuming, requiring specialized analysts for characterization of pathogenic fungi on seed. Multispectral imaging (MSI) combined with machine vision was used as an alternative method to detect Drechslera avenae (Eidam) Sharif [Helminthosporium avenae (Eidam)] in black oat seeds (Avena strigosa Schreb). The seeds were inoculated with Drechslera avenae (D. avenae) and then incubated for 24, 72 and 120 h. Multispectral images of non-infested and infested seeds were acquired at 19 wavelengths within the spectral range of 365 to 970 nm. A classification model based on linear discriminant analysis (LDA) was created using reflectance, color, and texture features of the seed images. The model developed showed high performance of MSI in detecting D. avenae in black oat seeds, particularly using color and texture features from seeds incubated for 120 h, with an accuracy of 0.86 in independent validation. The high precision of the classifier showed that the method using images captured in the Ultraviolet A region (365 nm) could be easily used to classify black oat seeds according to their health status, and results can be achieved more rapidly and effectively compared to conventional methods.

Highlights

  • In South America, black oats (Avena strigosa Schreb) are cultivated as cover crops or for grain/seed production

  • D. avenae spores were isolated from black oat seeds of ‘Embrapa 29’ cultivar using the deep-freezing blotter method

  • The Multispectral imaging (MSI) showed low separation of uninoculated seeds from inoculated seeds for 24 h, but clearly enabled discrimination of seeds inoculated for longer periods at 72 and 120 h

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Summary

Introduction

In South America, black oats (Avena strigosa Schreb) are cultivated as cover crops or for grain/seed production. Black oat seed oil has the potential to be used in food and cosmetic industries due to its great nutritional value and bioactive compounds [1,2]. In Brazil, seed and grain production was estimated at 275,000 and 900,000 tons, respectively, in the 2019 commercial harvest [3,4]. In order to guarantee high productivity, seeds must meet high quality standards, especially considering health attributes. Seed-borne phytopathogenic fungi can be transferred from farm to farm, reducing the physiological potential of plants with huge economic losses in the production system [5,6].

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