Abstract

The development of X-ray free-electron lasers (XFELs) has opened the possibility to investigate the ultrafast dynamics of biomacromolecules using X-ray diffraction. Whereas an increasing number of structures solved by means of serial femtosecond crystallography at XFELs is available, the effect of radiation damage on protein crystals during ultrafast exposures has remained an open question. We used a split-and-delay line based on diffractive X-ray optics at the Linac Coherent Light Source XFEL to investigate the time dependence of X-ray radiation damage to lysozyme crystals. For these tests, crystals were delivered to the X-ray beam using a fixed-target approach. The presented experiments provide probe signals at eight different delay times between 19 and 213 femtoseconds after a single pump event, thereby covering the time-scales relevant for femtosecond serial crystallography. Even though significant impact on the crystals was observed at long time scales after exposure with a single X-ray pulse, the collected diffraction data did not show significant signal reduction that could be assigned to beam damage on the crystals in the sampled time window and resolution range. This observation is in agreement with estimations of the applied radiation dose, which in our experiment was clearly below the values expected to cause damage on the femtosecond time scale. The experiments presented here demonstrate the feasibility of time-resolved pump-multiprobe X-ray diffraction experiments on protein crystals.

Highlights

  • There has been a growing interest of structural biology in serial protein crystallography at X-ray free-electron lasers (XFELs) facilities, and the method has led to increasing numbers of solved structures

  • XFEL pulses of approximately 45 fs, at an average of 3.2 mJ energy, at a wavelength of 2.48 A (5 keV) were used for the pump-probe experiments on protein crystals grown on the solid supports

  • This study demonstrates the feasibility of diffraction data collection on protein crystals by utilizing an X-ray diffraction grating-based multiple beam split-and-delay line

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Summary

INTRODUCTION

Resolved measurements on proteins, the ultrashort pulses of XFELs can overcome the radiation damage limitations encountered when using synchrotron radiation. In this case, the investigation of microcrystals is limited by the fact that radiation damage often prevents the collection of useful diffraction datasets when using very intense, tightly focused X-ray beams. By sequentially collecting diffraction patterns from newly supplied crystals with identical structure and random orientation, it was demonstrated that it is possible to collect diffraction data suitable for solving the molecular structure of proteins.. There has been a growing interest of structural biology in serial protein crystallography at XFELs facilities, and the method has led to increasing numbers of solved structures. By sequentially collecting diffraction patterns from newly supplied crystals with identical structure and random orientation, it was demonstrated that it is possible to collect diffraction data suitable for solving the molecular structure of proteins. More recently, there has been a growing interest of structural biology in serial protein crystallography at XFELs facilities, and the method has led to increasing numbers of solved structures.

Radiation damage mechanisms in protein crystals
Experimental approaches to radiation damage at XFELs
Experimental setup and diffraction geometry
Crystalline protein sample delivery
Pump-multiprobe femtosecond data collection
Procedure for calculating line profiles of diffraction intensities
Estimation of the dose on the exposed crystals
Diffraction data collection
Data analysis
CONCLUSIONS
Methods
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