Demographic independence along ecosystem boundaries in Steller sea lions revealed by mtDNA analysis: implications for management of an endangered species

Abstract

Previous genetic studies indicate Steller sea lions ( Eumetopias jubatus (Schreber, 1776)) comprise three phylogeographically distinct populations. However, differences in population trends and ecology and the limited extent of recorded dispersal suggest structure may be present at smaller scales. We examined sequence variation within a longer segment (531 bp) of the mtDNA control region in greater numbers (n = 1654) of sea lions from across Alaska than earlier investigations to investigate fine-scale dispersal patterns in Steller sea lions. We detected high levels of haplotypic diversity (h = 0.934) and confirmed phylogeographic differentiation between southeastern and western Alaska (Φst= 0.23, P < 0.0001), but also found significant differentiation at regional and local scales. Rookeries in the Gulf of Alaska, eastern Bering Sea, and eastern Aleutians were distinct from rookeries in the central and western Aleutians (Fst= 0.021, P < 0.0001; Φst= 0.017, P < 0.0001). The location of this split coincides with an oceanographic divergence between continental shelf and ocean basin waters and with differences in sea lion foraging ecology and population trends. A number of rookeries were also significantly differentiated from nearby rookeries (Fst= 0.02–0.025, P < 0.05), signifying substantial female-mediated philopatry, in some cases, at local scales. These findings have important implications for understanding the ecology of Steller sea lions in relation to marine ecosystems and the causes of population declines, and they provide guidance for management, including the identification of management stocks.