Abstract

Streptococcus groups A and B cause serious infections, including early onset sepsis and meningitis in newborns. Rib domain-containing surface proteins are found associated with invasive strains and elicit protective immunity in animal models. Yet, despite their apparent importance in infection, the structure of the Rib domain was previously unknown. Structures of single Rib domains of differing length reveal a rare case of domain atrophy through deletion of 2 core antiparallel strands, resulting in the loss of an entire sheet of the β-sandwich from an immunoglobulin-like fold. Previously, observed variation in the number of Rib domains within these bacterial cell wall-attached proteins has been suggested as a mechanism of immune evasion. Here, the structure of tandem domains, combined with molecular dynamics simulations and small angle X-ray scattering, suggests that variability in Rib domain number would result in differential projection of an N-terminal host-colonization domain from the bacterial surface. The identification of 2 further structures where the typical B-D-E immunoglobulin β-sheet is replaced with an α-helix further confirms the extensive structural malleability of the Rib domain.

Highlights

  • Streptococcus groups A and B cause serious infections, including early onset sepsis and meningitis in newborns

  • Rib belongs to the “alpha-like proteins of Group B Streptococcus (GBS)” family, that includes alpha C, and that has similar overall organization, including related N termini followed by a series of identical Rib domains (Pfam: PF08428) [5, 6]

  • We study Rib domains from Rib, R28, and from a surface protein from Lactobacillus acidophilus. These 5 structures of homologous Rib domains, and further sequence analyses, show Rib is an example of domain atrophy [15], a rare event in domain structural evolution involving the loss of core secondary structure elements, and reveal the remarkable structural malleability of this

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Summary

Introduction

Streptococcus groups A and B cause serious infections, including early onset sepsis and meningitis in newborns. The structure, molecular dynamics simulations, and small angle X-ray scattering of a Rib domain pair suggest tandemly arrayed domains are likely to form an elongated rod on the bacterial cell surface, suggesting a possible mechanism of immune evasion mediated through domain number variation.

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