Abstract

The γ-aminobutyric acid type A receptor-associated protein (GABARAP) and its close paralogs GABARAPL1 and GABARAPL2 constitute a subfamily of the autophagy-related 8 (Atg8) protein family. Being associated with a variety of dynamic membranous structures of autophagic and non-autophagic origin, Atg8 proteins functionalize membranes by either serving as docking sites for other proteins or by acting as membrane tethers or adhesion factors. In this study, we describe that deficiency for GABARAP alone, but not for its close paralogs, is sufficient for accelerated EGF receptor (EGFR) degradation in response to EGF, which is accompanied by the downregulation of EGFR-mediated MAPK signaling, altered target gene expression, EGF uptake, and EGF vesicle composition over time. We further show that GABARAP and EGFR converge in the same distinct compartments at endogenous GABARAP expression levels in response to EGF stimulation. Furthermore, GABARAP associates with EGFR in living cells and binds to synthetic peptides that are derived from the EGFR cytoplasmic tail in vitro. Thus, our data strongly indicate a unique and novel role for GABARAP during EGFR trafficking.

Highlights

  • The epidermal growth factor receptor (EGFR/ErbB1) is a plasma membrane bound receptor tyrosine kinase (RTK) that is expressed in many different cell types and plays an important role in numerous processes, such as development, tissue homeostasis, and regeneration [1,2], by binding a variety of ligands, including transforming growth factor-α (TGF α) [3], amphiregulin [4], and the eponymous epidermal growth factor [5]

  • We generated Human embryonic kidney 293 (HEK293) knockout (KO) cells deficient for each GABARAP subfamily member alone (SKO) or in double (DKO) and triple (TKO) combination using the CRISPR/Cas9 system to systematically investigate the role of GABARAP-subfamily proteins during EGF receptor (EGFR) degradation (Figure S1A, Table S1)

  • Levels when compared to their respective controls, GABARAPL1 deficiency resulted in a slight increase in EGFR at most time points, and a trend towards reduced EGFR levels could be observed for

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Summary

Introduction

The epidermal growth factor receptor (EGFR/ErbB1) is a plasma membrane bound receptor tyrosine kinase (RTK) that is expressed in many different cell types and plays an important role in numerous processes, such as development, tissue homeostasis, and regeneration [1,2], by binding a variety of ligands, including transforming growth factor-α (TGF α) [3], amphiregulin [4], and the eponymous epidermal growth factor [5] The binding of these ligands causes either homo- or heterodimerization with the other members of the erythroblastosis oncogene B (ErbB) superfamily. Whereas the former mainly occurs under low ligand concentrations, leading to sustained EGFR signaling and enhanced recycling back to the plasma membrane through a non-degradative sorting pathway, with the latter being accompanied by monoubiquitination at several sites and packaging of activated receptors in intraluminal vesicles (ILV)

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