Deep learning for automated classification of tuberculosis-related chest X-Ray: dataset distribution shift limits diagnostic performance generalizability

Abstract

BackgroundMachine learning has been an emerging tool for various aspects of infectious diseases including tuberculosis surveillance and detection. However, the World Health Organization (WHO) provided no recommendations on using computer-aided tuberculosis detection software because of a small number of studies, methodological limitations, and limited generalizability of the findings. MethodsTo quantify the generalizability of the machine-learning model, we developed a Deep Convolutional Neural Network (DCNN) model using a Tuberculosis (TB)-specific chest x-ray (CXR) dataset of one population (National Library of Medicine Shenzhen No.3 Hospital) and tested it with non-TB-specific CXR dataset of another population (National Institute of Health Clinical Centers). ResultsIn the training and intramural test sets using the Shenzhen hospital database, the DCCN model exhibited an AUC of 0.9845 and 0.8502 for detecting TB, respectively. However, the AUC of the supervised DCNN model in the ChestX-ray8 dataset was dramatically dropped to 0.7054. Using the cut points at 0.90, which suggested 72% sensitivity and 82% specificity in the Shenzhen dataset, the final DCNN model estimated that 36.51% of abnormal radiographs in the ChestX-ray8 dataset were related to TB. ConclusionA supervised deep learning model developed by using the training dataset from one population may not have the same diagnostic performance in another population. Conclusion: Technical specification of CXR images, disease severity distribution, dataset distribution shift, and overdiagnosis should be examined before implementation in other settings.