Abstract

Serial block-face scanning electron microscopy (SBEM) is quickly becoming an important imaging tool to explore three-dimensional biological structure across spatial scales. At probe-beam-electron energies of 2.0 keV or lower, the axial resolution should improve, because there is less primary electron penetration into the block face. More specifically, at these lower energies, the interaction volume is much smaller, and therefore, surface detail is more highly resolved. However, the backscattered electron yield for metal contrast agents and the backscattered electron detector sensitivity are both sub-optimal at these lower energies, thus negating the gain in axial resolution. We found that the application of a negative voltage (reversal potential) applied to a modified SBEM stage creates a tunable electric field at the sample. This field can be used to decrease the probe-beam-landing energy and, at the same time, alter the trajectory of the signal to increase the signal collected by the detector. With decelerated low landing-energy electrons, we observed that the probe-beam-electron-penetration depth was reduced to less than 30 nm in epoxy-embedded biological specimens. Concurrently, a large increase in recorded signal occurred due to the re-acceleration of BSEs in the bias field towards the objective pole piece where the detector is located. By tuning the bias field, we were able to manipulate the trajectories of the primary and secondary electrons, enabling the spatial discrimination of these signals using an advanced ring-type BSE detector configuration or a standard monolithic BSE detector coupled with a blocking aperture.

Highlights

  • IntroductionSerial block-face scanning electron microscopy (SBEM) has proved to be a remarkable technique for imaging at moderate lateral and axial resolution (approximately 10 and 40 nm, respectively) and across large fields of view spanning many hundreds of microns of sample

  • Serial block-face scanning electron microscopy (SBEM) has proved to be a remarkable technique for imaging at moderate lateral and axial resolution and across large fields of view spanning many hundreds of microns of sample

  • The backscattered electron (BSE) that escape from the surface after successive scattering are plotted in black, and the incident beam electrons that do not escape, i.e., the incident electrons that get deposited in the carbon substrate, are plotted in gray

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Summary

Introduction

Serial block-face scanning electron microscopy (SBEM) has proved to be a remarkable technique for imaging at moderate lateral and axial resolution (approximately 10 and 40 nm, respectively) and across large fields of view spanning many hundreds of microns of sample. This technique is elucidating processes, where selectively stained cells within large fields of view can be found [1,2,3] and small details can be followed across multiscale dimensions. A 3D volume is obtained by stacking the images of the block face obtained after each microtomy cycle

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