Abstract

Relapse is the major cause of treatment-failure in adults with B-cell acute lymphoblastic leukemia (ALL) achieving complete remission after induction chemotherapy. Greater precision identifying persons likely to relapse is important. We did bio-informatics analyses of transcriptomic data to identify mRNA transcripts aberrantly-expressed in B-cell ALL. We selected 9 candidate genes for validation 7 of which proved significantly-associated with B-cell ALL. We next focused on function and clinical correlations of the cysteine and glycine-rich protein 2 (CSRP2). Quantitative real-time polymerase chain reaction (RT-qPCR) was used to examine gene transcript levels in bone marrow samples from 236 adults with B-cell ALL compared with samples from normals. CSRP2 was over-expressed in 228 out of 236 adults (97%) with newly-diagnosed B-cell ALL. A prognostic value was assessed in 168 subjects. In subjects with normal cytogenetics those with high CSRP2 transcript levels had a higher 5-year cumulative incidence of relapse (CIR) and worse relapse-free survival (RFS) compared with subjects with low transcript levels (56% [95% confidence interval, 53, 59%] vs. 19% [18, 20%]; P = 0.011 and 41% [17, 65%] vs. 80% [66–95%]; P = 0.007). In multivariate analyses a high CSRP2 transcript level was independently-associated with CIR (HR = 5.32 [1.64–17.28]; P = 0.005) and RFS (HR = 5.56 [1.87, 16.53]; P = 0.002). Functional analyses indicated CSRP2 promoted cell proliferation, cell-cycle progression, in vitro colony formation and cell migration ability. Abnormal CSRP2 expression was associated with resistance to chemotherapy; sensitivity was restored by down-regulating CSRP2 expression.

Highlights

  • B-cell acute lymphoblastic leukemia (ALL) is characterized by clonal expansion of developmentallyarrested B-cell precursors [1]

  • We show increased cysteine and glycine-rich protein 2 (CSRP2) transcript levels are independentlyassociated with higher cumulative incidence of relapse (CIR) and worse relapse-free survival (RFS) in adults with B-cell ALL and normal cytogenetics

  • We found CSRP2 transcripts were uniformly low in bone marrow mononuclear cells from normals whereas transcript levels were high in cells from adults with newly-diagnosed B-cell ALL

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Summary

Introduction

B-cell acute lymphoblastic leukemia (ALL) is characterized by clonal expansion of developmentallyarrested B-cell precursors [1]. Survival of adults with B-cell ALL has improved relapse is an important problem. Prognostic models for relapse include age, WBC levels at diagnosis, immune phenotype, cytogenetics, mutational landscape, response to induction therapy and measureable residual disease (MRD) after completing therapy [2]. Adverse cytogenetic and mutations include hypo-diploidy (< 44 chromosomes), MLL/11q23 translocations, complex cytogenetics (≥ 5 abnormalities) and t (9; 22) and/or BCR-ABL1 [2]. About onehalf of adults with B-cell ALL have none of the adverse prognostic variables at diagnosis making predicting relapse difficult, especially so in those with normal cytogenetics [3, 4]. Identifying a new prognostic variable in these persons is important [5]

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