Abstract

Typhoid fever caused by the bacteria Salmonella typhi gained resistance through multidrug-resistant S. typhi strains. One of the reasons behind β-lactam antibiotic resistance is -lactamase. L, D-Transpeptidases is responsible for typhoid fever as it is involved in toxin release that results in typhoid fever in humans. A molecular modeling study of these targeted proteins was carried out by various methods, such as homology modeling, active site prediction, prediction of disease-causing regions, and by analyzing the potential inhibitory activities of curcumin analogs by targeting these proteins to overcome the antibiotic resistance. The five potent drug candidate compounds were identified to be natural ligands that can inhibit those enzymes compared to controls in our research. The binding affinity of both the Go-Y032 and NSC-43319 were found against β-lactamase was −7.8 Kcal/mol in AutoDock, whereas, in SwissDock, the binding energy was −8.15 and −8.04 Kcal/mol, respectively. On the other hand, the Cyclovalone and NSC-43319 had an equal energy of −7.60 Kcal/mol in AutoDock, whereas −7.90 and −8.01 Kcal/mol in SwissDock against L, D-Transpeptidases. After the identification of proteins, the determination of primary and secondary structures, as well as the gene producing area and homology modeling, was accomplished. The screened drug candidates were further evaluated in ADMET, and pharmacological properties along with positive drug-likeness properties were observed for these ligand molecules. However, further in vitro and in vivo experiments are required to validate these in silico data to develop novel therapeutics against antibiotic resistance.

Highlights

  • Molinspiration allows for the prediction of significant molecular parameters, as well as the prediction of bioactivity scores for the most relevant therapeutic targets

  • Among 70 types of ligands, all the compounds except DM1 were compatible with the drug-likeness features

  • After a successive screening of all potent ligands, this study suggests Go-Y032, Cyclovalone, NSC-43319, Difluorinated curcumin, Salsalate, and Cyclocurcumin as the best inhibitors of the enzymes β-lactamase and L, D-Transpeptidases, respectively, while NSC-43319, Cyclovalone, Cyclocurcumin, and Go-Y032 are recommended for both

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Summary

Introduction

A globally estimated 12–27 million people get stricken with typhoid fever each year, whereas the overall yearly estimated incidence lies between 292 and 395 cases per 100,000 people in Bangladesh. Biomedinformatics 2022, 2 the intestinal tract and blood [1,2,3,4,5]. Due to the ever-increasing pattern of MDR in many parts of the world, combating typhoid is becoming more difficult, creating a major public health concern around the world [7]

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