Crystal structure simulation of cationic cholesteric Liquid-Crystal polyesters. Non-Viral vectors

Abstract

The crystal structure of six cationic cholesteric liquid crystal polyesters with choline, ammonium, and amide end groups are reported: PTOBEE-Choline [(C26H20O8)n-C5H13N]; PTOBDME-Choline [(C34H36O8)n-C5H13N]; PTOBEE-Ammonium [(C26H20O8)n-C5H13N]; PTOBDME-Ammonium [(C34H36O8)n-C5H13N]; PTOBEE-Amide (C26H19O9N)n and PTOBUME-Amide (C33H33O9N)n, have demonstrated non-viral vector properties in gene therapy by delivering DNA to the cell nucleus. They were synthesized by functionalization of precursor racemic polyesters via a condensation reaction between 4,4′-(terephthaloyl-di-oxydibenzoic chloride) (TOBC) and the racemic mixture of glycol (R-S-1,2-butanediol) or (R-S-1,2-dodecanediol), respectively. The resulting helical macromolecular structures exhibit unexpected optical activity and chiral morphology, previously attributed to the kinetic resolution of one preferable helical conformer of the possible four observed by NMR. Conformational analysis and energy minimization are performed on the four helical conformer monomeric models which are then polymerized to obtain helical chains. Three levels of chirality were observed in these polymer structures. Crystal models are built in triclinic primitive P1cells, with their molecular chains oriented parallel to the Z-axis (c lattice parameter equal to the helical pitch length), the cell parameters are obtained by performing geometry optimization tasks. A raw estimation of the relative weight of the four possible helical conformers on each synthetic cationic polymer has been performed on ideal mixtures considering their approximate known crystal structure with their experimental X-ray powder diffraction by Powder Quantitative Phase Analysis. The results would confirm the theory of the preferable recrystallization of a diastereoisomer, among the four possible, during the synthetic procedures. These findings shed light on the observed optical activity and provide insights into the crystal structure of these cationic polymers. The morphology of the cationic polymers is studied by ESEM in wet samples and crystals after drying the solvent.