Abstract

The causative agent of severe acute respiratory syndrome (SARS) is the SARS-associated coronavirus, SARS-CoV. The nucleocapsid (N) protein plays an essential role in SARS-CoV genome packaging and virion assembly. We have previously shown that SARS-CoV N protein forms a dimer in solution through its C-terminal domain. In this study, the crystal structure of the dimerization domain, consisting of residues 270–370, is determined to 1.75Å resolution. The structure shows a dimer with extensive interactions between the two subunits, suggesting that the dimeric form of the N protein is the functional unit in vivo. Although lacking significant sequence similarity, the dimerization domain of SARS-CoV N protein has a fold similar to that of the nucleocapsid protein of the porcine reproductive and respiratory syndrome virus. This finding provides structural evidence of the evolutionary link between Coronaviridae and Arteriviridae, suggesting that the N proteins of both viruses have a common origin.

Highlights

  • Coronaviruses are enveloped, single-stranded, positive-sense RNA viruses that infect a variety of mammals and birds

  • Previously identified human coronaviruses cause only mild respiratory infections, in the 2003 outbreak of severe acute respiratory syndrome (SARS),3 a disease caused by a new type of coronavirus (SARS-CoV), there were more than 8,000 cases resulting in 774 deaths (ϳ10% mortality)

  • Crystallization and Structure Determination—The full-length SARSCoV N protein (SARS N) and 18 truncated constructs were expressed in JUNE 23, 2006

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Summary

No of water molecules

97.5 2.5 0.0 0.0 a Values in parentheses are for the highest resolution shell. b Rsym ϭ͉Ii ϪI ͉/ ͚Ii, where Ii is the intensity of the ith observation andIis the mean intensity of the reflection. c R ϭʈ Fo Ϫ Fo ʈ/͚͉Fo, where Fo and Fc are the observed and calculated structure factors amplitudes. 97.5 2.5 0.0 0.0 a Values in parentheses are for the highest resolution shell. B Rsym ϭ͉Ii ϪI ͉/ ͚Ii, where Ii is the intensity of the ith observation andIis the mean intensity of the reflection. C R ϭʈ Fo Ϫ Fo ʈ/͚͉Fo, where Fo and Fc are the observed and calculated structure factors amplitudes. Rfree is calculated using 5% of the total reflections. Of significant sequence similarity, adds further evidence that Coronaviridae and Arteriviridae have evolved from a common ancestor

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