Abstract

DNA polymerase zeta (Polzeta) is an error-prone DNA polymerase involved in translesion DNA synthesis. Polzeta consists of two subunits: the catalytic REV3, which belongs to B family DNA polymerase, and the noncatalytic REV7. REV7 also interacts with REV1 polymerase, which is an error-prone Y family DNA polymerase and is also involved in translesion DNA synthesis. Cells deficient in one of the three REV proteins and those deficient in all three proteins show similar phenotype, indicating the functional collaboration of the three REV proteins. REV7 interacts with both REV3 and REV1 polymerases, but the structure of REV7 or REV3, as well as the structural and functional basis of the REV1-REV7 and REV3-REV7 interactions, remains unknown. Here we show the first crystal structure of human REV7 in complex with a fragment of human REV3 polymerase (residues 1847-1898) and reveal the mechanism underlying REV7-REV3 interaction. The structure indicates that the interaction between REV7 and REV3 creates a structural interface for REV1 binding. Furthermore, we show that the REV7-mediated interactions are responsible for DNA damage tolerance. Our results highlight the function of REV7 as an adapter protein to recruit Polzeta to a lesion site. REV7 is alternatively called MAD2B or MAD2L2 and also involved in various cellular functions such as signal transduction and cell cycle regulation. Our results will provide a general structural basis for understanding the REV7 interaction.

Highlights

  • §, ‡, ‡, From the ‡Graduate School of Nanobioscience, Yokohama City University, 1-7-29 Suehiro-cho, Tsurumi-ku, Yokohama 230-0045, Japan, the §Graduate School of Medicine, Nagoya University, 65 Tsurumai, Showa-ku, Nagoya 466-8550, Japan, and the ¶Graduate School of Medicine, Kyoto University, Konoe Yoshida, Sakyo-ku, Kyoto 606-8501, Japan

  • Pol␨ consists of two subunits: the catalytic REV3, which belongs to B family DNA polymerase, and the noncatalytic REV7

  • REV7 interacts with REV1 polymerase, which is an error-prone Y family DNA polymerase and is involved in translesion DNA synthesis

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Summary

Satoko Akashi

§, ‡, ‡, From the ‡Graduate School of Nanobioscience, Yokohama City University, 1-7-29 Suehiro-cho, Tsurumi-ku, Yokohama 230-0045, Japan, the §Graduate School of Medicine, Nagoya University, 65 Tsurumai, Showa-ku, Nagoya 466-8550, Japan, and the ¶Graduate School of Medicine, Kyoto University, Konoe Yoshida, Sakyo-ku, Kyoto 606-8501, Japan. We show the first crystal structure of human REV7 in complex with a fragment of human REV3 polymerase (residues 1847–1898) and reveal the mechanism underlying REV7REV3 interaction. Chicken DT40 cells deficient in one of the three REV proteins and those deficient in all three proteins show hypersensitivity to various genotoxic treatment including cisplatin (cis-diaminedichloroplatinum (II)), indicating the functional collaboration of the three REV proteins [26] These previous analyses failed to determine the mechanism underlying the protein-protein interactions on the atomic revel, because they tried to analyze without data of the three-dimensional structures. The mechanism underlying the recruitment of the extender polymerase to the lesion site and the second polymerase switching as well as the physical and functional interactions of REV1, REV3, and REV7 remains unclear. Our results will provide a general structural basis for understanding the REV7 interaction in various cellular functions

EXPERIMENTAL PROCEDURES
RESULTS AND DISCUSSION
Data collection
This observation suggests that the
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