Abstract
The POU domain transcription factor Oct4 plays critical roles in self-renewal and pluripotency of embryonic stem cells (ESCs). Together with Sox2, Klf4 and c-Myc, Oct4 can reprogram any other cell types to pluripotency, in which Oct4 is the only factor that cannot be functionally replaced by other POU family members. To investigate the determinant elements of Oct4 uniqueness, we performed Ala scan on all Ser, Thr, Tyr, Lys and Arg of murine Oct4 by testing their capability in somatic cell reprogramming. We uncovered a series of residues that are important for Oct4 functionality, in which almost all of these key residues are within the POU domains making direct interaction with DNA. The Oct4 N- and C-terminal transactivation domains (TADs) are not unique and could be replaced by the Yes-associated protein (YAP) TAD domain to support reprogramming. More importantly, we uncovered two important residues that confer Oct4 uniqueness in somatic cell reprogramming. Our systematic structure-function analyses bring novel mechanistic insight into the molecular basis of how critical residues function together to confer Oct4 uniqueness among POU family for somatic cell reprogramming.
Highlights
The Oct[4] protein of the POU (Pit[1], Oct1/Oct[2], UNC-86) family, together with Sox[2] and Nanog, composes the core transcription factor circuitry that is essential for early embryogenesis and plays a central role in self-renewal and pluripotency of embryonic stem cells, as well as their differentiation into specific lineages[1]
While 56 of 90 mutant forms of Oct[4] in combination with Sox[2], Klf[4], and c-Myc produced a comparable number of green fluorescent protein (GFP)-positive colonies to wild-type Oct[4, 34] mutants covering 34 sites, generated significantly fewer or no induced pluripotent stem cells (iPSCs) colonies (Supplementary Fig. S1c)
Our findings revealed that mutating these Lys and Arg residues to alanine interferes with Oct4-DNA interactions, influencing the induction of downstream pluripotency genes and the reprogramming of somatic cells into iPSCs (Supplementary Fig. S1g)
Summary
The Oct[4] protein of the POU (Pit[1], Oct1/Oct[2], UNC-86) family, together with Sox[2] and Nanog, composes the core transcription factor circuitry that is essential for early embryogenesis and plays a central role in self-renewal and pluripotency of embryonic stem cells, as well as their differentiation into specific lineages[1]. Our systematic structure-function analyses bring novel mechanistic insights into molecular understanding of how critical residues function together to confer Oct[4] DNA binding specificity and make it unique among POU family for somatic cell reprogramming
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