Abstract
BackgroundPseudomonas aeruginosa is an important opportunistic human pathogen that is commonly encountered clinically in different types of infections. Reporter-gene systems and construction of mutants defective in specific functions are useful tools for studying the cellular physiology and virulence of this organism. The common mutant construction process requires constructing target alleles into large size suicide vector(s) for transformations, and extra steps involved in resolving merodiploids. Here we describe a new approach using linearized plasmid transformation for creating a green fluorescent protein (GFP) reporter gene system to study promoter activities in P. aeruginosa.FindingsWe successfully created promoter–reporter fusion plasmids for studying the promoter activity of virulence genes in P. aeruginosa. The promoter of exoenzyme S (a virulence factor) was used in preparation of these fusion plasmids. These fusion plasmids were linearized and used directly to transform P. aeruginosa. Stable P. aeruginosa chromosomally integrated promoter–reporter fusion mutants were obtained. We demonstrated that the promoter of Exoenzyme S gene was activated when P. aeruginosa was grown in a biofilm state, as evidenced by the expression of GFP in these biofilm cells.ConclusionDirect transformation with linearized plasmid DNA provides another avenue to create P. aeruginosa mutants. This new approach eliminates the use of suicide vector(s) for creating P. aeruginosa mutants, and thus speeds up the process mutant construction.Electronic supplementary materialThe online version of this article (doi:10.1186/s13104-016-2130-3) contains supplementary material, which is available to authorized users.
Highlights
Pseudomonas aeruginosa is an important opportunistic human pathogen that is commonly encountered clinically in different types of infections
Direct transformation with linearized plasmid DNA provides another avenue to create P. aeruginosa mutants. This new approach eliminates the use of suicide vector(s) for creating P. aeruginosa mutants, and speeds up the process mutant construction
An approximate 2.2 kb intergenic region between open reading frames (ORFs) of PA3835 and PA3836—a region without any transcription based on our unpublished RNA Sequencing (RNA-Seq) data—was PCR-amplified using primers containing XhoI sites, and cloned into cloning vector pDONR/Zeo from Invitrogen
Summary
Pseudomonas aeruginosa is an important opportunistic human pathogen that is commonly encountered clinically in different types of infections. The ubiquitous Gram-negative Pseudomonas aeruginosa is an important opportunistic human pathogen. This organism has a large genome of 6.3 million nucleotides [1], and causes both life-threatening acute infections as shown in burn patients, and chronic lung infections as in cystic fibrosis patients [2]. It is important to understand the regulatory pathways controlling the expression of virulence in P. aeruginosa under different conditions and time. This can be accomplished by studying the promoter activities of virulence genes at both individual and global gene expression levels (such as RNA sequencing)
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