Corona Phase Molecular Recognition of Interleukin-6 Family Cytokines Using Nir Single Walled Carbon Nanotube

Abstract

The Interleukin-6 (IL-6) family of cytokines regulate inflammation and play important roles in numerous biochemical pathways. Understanding the fundamental molecular recognition of these molecules with synthetic substrates is key to new biomedical technologies, including assays and sensors, therapeutics and purification methods. In this work, we use Corona Phase Molecular Recognition (CoPhMoRe) to engineer new carbon nanotubes corona phases and study nanotube binding to IL6. Library screening identifies two CoPhMoRe constructs based on carbon nanotube complexation with a p(AA68-rand-BA 16 -rand-CD 16 ) polymer (MK2) and a p(SS80-rand-BS 20 ) polymer (P14) corona phases respectively. Both exhibit KD of binding of 8.38 ng/mL and 16.7 μg/mL respectively, with MK2 construct having a response function consistent with two stage binding for IL-6. Comparative binding experiments show that both constructs appear to recognize the axially aligned alpha-helical structures present in the IL-6 and other IL-6 family cytokines. The findings from this study elucidate how nanoparticle interfaces can be designed to lock onto specific protein features, particularly alpha-helical structures, to enable molecular recognition and new types of sensing technologies.