Abstract

Interest in microbial rhodopsins with ion pumping activity has been revitalized in the context of optogenetics, where light-driven ion pumps are used for cell hyperpolarization and voltage sensing. We identified an opsin-encoding gene (CsR) in the genome of the arctic alga Coccomyxa subellipsoidea C-169 that can produce large photocurrents in Xenopus oocytes. We used this property to analyze the function of individual residues in proton pumping. Modification of the highly conserved proton shuttling residue R83 or its interaction partner Y57 strongly reduced pumping power. Moreover, this mutation converted CsR at moderate electrochemical load into an operational proton channel with inward or outward rectification depending on the amino acid substitution. Together with molecular dynamics simulations, these data demonstrate that CsR-R83 and its interacting partner Y57 in conjunction with water molecules forms a proton shuttle that blocks passive proton flux during the dark-state but promotes proton movement uphill upon illumination.

Highlights

  • Oocytes as well as in HEK-293 cells, which will enable researchers to study the molecular transport steps in greater detail than BR has ever allowed

  • All-trans retinal is linked to K215 of the protein (K216 in BR) via a protonated retinal Schiff-base (RSBH+), which is stabilized by a negatively charged counterion complex consisting of D86 and D211 (D85/D212 in BR)

  • CsR-D97 is reprotonated from the cytoplasmic bulk phase during the N to O transition

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Summary

Introduction

Oocytes as well as in HEK-293 cells, which will enable researchers to study the molecular transport steps in greater detail than BR has ever allowed. We capitalized on this advantage by characterizing CsR-WT and various mutants. We demonstrate that CsRs with mutations in these residues alone exhibit low active transport forces, if any, and operate as passive light-gated proton channels already at low electrochemical load. Such light-activated proton selective channels will be of great interest for optogenetic applications in which a specific proton release is required (e.g., in lysozymes or neuronal vesicles)

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