Control of stability and structure of nucleic acids using cosolutes

Abstract

The stabilities, structures, and functions of nucleic acids are responsive to surrounding conditions. Living cells contain biomolecules, including nucleic acids, proteins, polysaccharides, and other soluble and insoluble low-molecular weight components, that occupy a significant fraction of the cellular volume (up to 40%), resulting in a highly crowded intracellular environment. We have proven that conditions that mimic features of this intra-cellular environment alter the physical properties affect the stability, structure, and function of nucleic acids. The ability to control structure of nucleic acids by mimicking intra-cellular conditions will be useful in nanotechnology applications of nucleic acids. This paper describes methods that can be used to analyze quantitatively the intra-cellular environment effects caused by cosolutes on nucleic acid structures and to regulate properties of nucleic acids using cosolutes.