Abstract

Over recent years, genes and microRNA (miRNA/miR) have been considered as key biological factors in human carcinogenesis. During cancer development, genes may act as multiple identities, including target genes of miRNA, transcription factors and host genes. The present study concentrated on the regulatory networks consisting of the biological factors involved in cervical cancer in order to investigate their features and affect on this specific pathology. Numerous raw data was collected and organized into purposeful structures, and adaptive procedures were defined for application to the prepared data. The networks were therefore built with the factors as basic components according to their interacting associations. The networks were constructed at three levels of interdependency, including a differentially-expressed network, a related network and a global network. Comparisons and analyses were made at a systematic level rather than from an isolated gene or miRNA. Critical hubs were extracted in the core networks and notable features were discussed, including self-adaption feedback regulation. The present study expounds the pathogenesis from a novel point of view and is proposed to provide inspiration for further investigation and therapy.

Highlights

  • It is generally accepted that the accumulation of mutations in critical genes takes major responsibility for the evolution of cancer [1]

  • Research on miRNA, small [21‐24 nucleotides] non‐coding RNA molecules, has been more widely acknowledged [2]. miRNA affects the expression of genes at a post‐transcriptional level by binding to complementary sequences on target mRNA, resulting in translational repression or target degradation and gene silencing. miRNA participates in various biological processes, including proliferation, differentiation and apoptosis, independently or together with transcription factors (TFs)

  • The underlying networks composed of miRNA, target genes, TFs, host genes of miRNA and the regulatory associations represented in human cervical cancer were visualized

Read more

Summary

Introduction

The miRNA and genes, including TFs, involved in cervical cancer are the key elements of the analysis based on computational methods in the present study. The underlying networks composed of miRNA, target genes, TFs, host genes of miRNA and the regulatory associations represented in human cervical cancer were visualized. Various data was manually collected, including experimentally validated associations between miRNAs and their targets, experimentally validated associations between TFs and miRNAs, and associations of miRNAs and their host genes; they were reserved as fundamental resources to uncover regulatory mechanisms of genes and miRNA in cervical cancer. The present study revealed certain important core signal networks of TFs, miRNA, targets of miRNA and host genes of miRNA in cervical cancer.

Materials and methods
Results and Discussion
Bartel DP
Libermann TA and Zerbini LF
11. Baskerville S and Bartel DP
Full Text
Published version (Free)

Talk to us

Join us for a 30 min session where you can share your feedback and ask us any queries you have

Schedule a call