Abstract

The dynamics of the tumor suppressor protein p53 have been previously investigated in single cells using fluorescently tagged p53. Such approach reports on the total abundance of p53 but does not provide a measure for functional p53. We used fluorescent protein-fragment complementation assay (PCA) to quantify in single cells the dynamics of p53 tetramers, the functional units of p53. We found that while total p53 increases proportionally to the input strength, p53 tetramers are formed in cells at a constant rate. This breaks the linear input–output relation and dampens the p53 response. Disruption of the p53-binding protein ARC led to a dose-dependent rate of tetramers formation, resulting in enhanced tetramerization and induction of p53 target genes. Our work suggests that constraining the p53 response in face of variable inputs may protect cells from committing to terminal outcomes and highlights the importance of quantifying the active form of signaling molecules in single cells.Quantification of the dynamics of p53 tetramers in single cells using a fluorescent protein-fragment complementation assay reveals that, while total p53 increases proportionally to the DNA damage strength, p53 tetramers are formed at a constant rate.

Highlights

  • Biological systems often exhibit a graded response in which the stronger the input, the higher and broader the output

  • H Lysate crosslinking with 0.025% glutaraldehyde with or without DNA damage induction by NCS (400 ng/mL) on p53 wild-type and p53 L344A dimeric mutant tagged with YFP protein-fragment complementation assay (PCA) reporter system (C)

  • Each p53 was tagged to a full-length red fluorescent protein (RFP) to report for the total p53 protein in cells (Fig 1C)

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Summary

Introduction

Biological systems often exhibit a graded response in which the stronger the input, the higher and broader the output. In order to identify and characterize such potential mechanisms in biology, we need to be able to accurately measure both the total level of a signaling protein and its active form in the same cell in response to variable input strength. Transcription factors’ activity in cells can be measured by a transcriptional reporter, in which a target gene promoter drives the expression of a fluorescent protein. Such an approach has been used, for example, to study the activity of the circadian clock gene Per (Quintero et al, 2003). Tetramerization occurs post-translationally and is regulated by specific post-translational

Molecular Systems Biology 10
Results and Discussion
Materials and Methods

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