Abstract

Mutations in genes encoding cilia proteins cause human ciliopathies, diverse disorders affecting many tissues. Individual genes can be linked to ciliopathies with dramatically different phenotypes, suggesting that genetic modifiers may participate in their pathogenesis. The ciliary transition zone contains two protein complexes affected in the ciliopathies Meckel syndrome (MKS) and nephronophthisis (NPHP). The BBSome is a third protein complex, affected in the ciliopathy Bardet-Biedl syndrome (BBS). We tested whether mutations in MKS, NPHP and BBS complex genes modify the phenotypic consequences of one another in both C. elegans and mice. To this end, we identified TCTN-1, the C. elegans ortholog of vertebrate MKS complex components called Tectonics, as an evolutionarily conserved transition zone protein. Neither disruption of TCTN-1 alone or together with MKS complex components abrogated ciliary structure in C. elegans. In contrast, disruption of TCTN-1 together with either of two NPHP complex components, NPHP-1 or NPHP-4, compromised ciliary structure. Similarly, disruption of an NPHP complex component and the BBS complex component BBS-5 individually did not compromise ciliary structure, but together did. As in nematodes, disrupting two components of the mouse MKS complex did not cause additive phenotypes compared to single mutants. However, disrupting both Tctn1 and either Nphp1 or Nphp4 exacerbated defects in ciliogenesis and cilia-associated developmental signaling, as did disrupting both Tctn1 and the BBSome component Bbs1. Thus, we demonstrate that ciliary complexes act in parallel to support ciliary function and suggest that human ciliopathy phenotypes are altered by genetic interactions between different ciliary biochemical complexes.

Highlights

  • Despite accelerating success in identifying genetic variations, the relationship between genotype and phenotype in humans often remains obscure

  • Building off of our increasing knowledge of how different biochemical complexes contribute to ciliary function, we investigated how ciliopathyassociated genes interact to support ciliogenesis

  • Using a combination of nematode and mouse genetics, we found that genes encoding components of different biochemical complexes interact, whereas genes encoding different components within a single complex do not

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Summary

Introduction

Despite accelerating success in identifying genetic variations, the relationship between genotype and phenotype in humans often remains obscure. The genetic influences could include many common genetic variants with small effects, rare variants with large effects, and allele-specific gene-gene interactions. These genetic interactions can modify associated phenotypes through changes in gene expression, protein interactions, and effects on overlapping functions [1,2,3,4]. Meckel syndrome (MKS [MIM 249000]) is characterized by cystic kidney dysplasia, polydactyly, and occipital meningoencephalocoele. Nephronophthisis (NPHP [MIM 256100]), the most common genetic cause of renal failure in children, is characterized by cystic kidney dysplasia without limb or brain malformations. Bardet-Biedl syndrome (BBS [MIM 209900]), a disorder associated with at least nineteen loci, is characterized by cystic kidney dysplasia, polydactyly, retinal degeneration, obesity, and learning difficulties. Mutations in two loci can be required for ciliopathy penetrance

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