Abstract

BackgroundAs a result of past practices, many of the dry coniferous forests of the western United States contain dense, even-aged stands with uncharacteristically high levels of litter and downed woody debris. These changes to the forest have received considerable attention as they elevate concerns regarding the outcome of wildland fire. However, attempts to reduce biomass through fuel reduction (i.e., thinning of trees) are often opposed by public interest groups whose objectives include maintaining habitat for species of concern such as the spotted owl, Strix occidentalis, the northern goshawk, Accipiter gentilis, and the Pacific fisher, Martes pennanti. Whether protection of these upper-trophic level species confers adequate conservation of avian forest diversity is unknown.Methodology and Principal FindingsWe use a multi-species occurrence model to estimate the habitat associations of 47 avian species detected at 742 sampling locations within an 880-km2 area in the Sierra Nevada. Our approach, which accounts for variations in detectability of species, estimates occurrence probabilities of all species in a community by linking species occurrence models into one hierarchical community model, thus improving inferences on all species, especially those that are rare or observed infrequently. We address how the avian community is influenced by covariates related to canopy cover, tree size and shrub cover while accounting for the impacts of abiotic variables known to affect species distributions.Conclusions and SignificanceEnvironmental parameters estimated through our approach emphasize the importance of within and between stand-level heterogeneity in meeting biodiversity objectives and suggests that many avian species would increase under more open canopy habitat conditions than those favored by umbrella species of high conservation concern. Our results suggest that a more integrated approach that emphasizes maintaining a diversity of habitats across environmental gradients and minimizing urbanization may have a greater benefit to ecosystem functioning then a single-species management focus.

Highlights

  • Biodiversity is integral to ecosystem functioning [1,2,3] and services that are essential for human well-being [4,5]

  • We modeled the occurrence probability for each species i at location j using the logit link function and the relevant covariates such that: logit(yi,j )~a0i za1i :develj za2i :elevj za3i :elev2j za4i:precjza5i:prec2j za6i:DBHj za7i :DBHj2 za8i :DBHsdj za9i :coverj za10i:cover2j za11i:coverSDj za12i :scoverj za13i :scover2j where a0i is the intercept and a1i{a13i are the effects of the habitat covariates on species i

  • Seven additional species considered very rare, Calliope hummingbird Stellula calliope, Hammond’s flycatcher Empidonax hammondii, lesser goldfinch Spinus psaltria, Pacific-slope flycatcher Empidonax difficilis, purple finch Carpodacus purpureus, ruby-crowned kinglet Regulus calendula, and yellow warbler Dendroica petechia), were observed fewer than 20 times, and they were included in our hierarchical model but not in our presentation of covariate estimates for individual species because their covariate estimates could be misleading

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Summary

Introduction

Biodiversity is integral to ecosystem functioning [1,2,3] and services that are essential for human well-being [4,5]. How a species responds to a particular set of habitat conditions may vary spatially and temporally based on site-specific biotic and abiotic factors These complexities, along with limited financial resources to monitor the impact of various management practices, have resulted in a reliance on single-species measurements and the hope that individual species can serve as indicators for the response of other species in the community [11]. Attempts to reduce biomass through fuel reduction (i.e., thinning of trees) are often opposed by public interest groups whose objectives include maintaining habitat for species of concern such as the spotted owl, Strix occidentalis, the northern goshawk, Accipiter gentilis, and the Pacific fisher, Martes pennanti Whether protection of these upper-trophic level species confers adequate conservation of avian forest diversity is unknown

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