Abstract

The G protein-coupled receptor (GPCR) superfamily is an important drug target that includes over 1000 membrane receptors that functionally couple extracellular stimuli to intracellular effectors. Despite the potential of extracellular surface (ECS) residues in GPCRs to interact with subtype-specific allosteric modulators, few ECS pharmacophores for class A receptors have been identified. Using the turkey β(1)-adrenergic receptor crystal structure, we modeled the α(1B)-adrenoceptor (α(1B)-AR) to help identify the allosteric site for ρ-conopeptide TIA, an inverse agonist at this receptor. Combining mutational radioligand binding and inositol 1-phosphate signaling studies, together with molecular docking simulations using a refined NMR structure of ρ-TIA, we identified 14 residues on the ECS of the α(1B)-AR that influenced ρ-TIA binding. Double mutant cycle analysis and docking confirmed that ρ-TIA binding was dominated by a salt bridge and cation-π between Arg-4-ρ-TIA and Asp-327 and Phe-330, respectively, and a T-stacking-π interaction between Trp-3-ρ-TIA and Phe-330. Water-bridging hydrogen bonds between Asn-2-ρ-TIA and Val-197, Trp-3-ρ-TIA and Ser-318, and the positively charged N terminus and Glu-186, were also identified. These interactions reveal that peptide binding to the ECS on transmembrane helix 6 (TMH6) and TMH7 at the base of extracellular loop 3 (ECL3) is sufficient to allosterically inhibit agonist signaling at a GPCR. The ligand-accessible ECS residues identified provide the first view of an allosteric inhibitor pharmacophore for α(1)-adrenoceptors and mechanistic insight and a new set of structural constraints for the design of allosteric antagonists at related GPCRs.

Highlights

  • Mechanistic insight into allosteric modulation of G protein-coupled receptor (GPCR) can facilitate antagonist design

  • Water-bridging hydrogen bonds between Asn-2␳-TIA and Val-197, Trp-3-␳-TIA and Ser-318, and the positively charged N terminus and Glu-186, were identified. These interactions reveal that peptide binding to the extracellular surface (ECS) on transmembrane helix 6 (TMH6) and TMH7 at the base of extracellular loop 3 (ECL3) is sufficient to allosterically inhibit agonist signaling at a GPCR

  • Characterization of ␳-TIA and Prazosin Affinity at ECS Mutants of the ␣1B-AR—Given ␳-TIA is a relatively hydrophilic noncompetitive inhibitor, we hypothesized that this peptide does not partition into or across the cell membrane and likely binds to ECS residues above and separate from the orthosteric site that is deeper in the transmembrane helical bundle of ␣1-ARs

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Summary

Background

Mechanistic insight into allosteric modulation of GPCRs can facilitate antagonist design. Water-bridging hydrogen bonds between Asn-2␳-TIA and Val-197, Trp-3-␳-TIA and Ser-318, and the positively charged N terminus and Glu-186, were identified These interactions reveal that peptide binding to the ECS on transmembrane helix 6 (TMH6) and TMH7 at the base of extracellular loop 3 (ECL3) is sufficient to allosterically inhibit agonist signaling at a GPCR. Using a refined NMR structure of ␳-TIA and a turkey ␤1-AR-derived homology model of the ␣1B-AR to guide docking simulations and mutagenesis studies, we established the specific molecular interactions between ␳-TIA on the ECS of the ␣1B-AR that were confirmed by double mutant cycle experiments These findings, which reveal that peptide binding to ECS residues on TMH6 and TMH7 at the base of ECL3 can inhibit ␣1-AR signaling, may prove useful in guiding the design of new classes of allosteric inhibitors

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