Abstract

Ab initio MP2/aug’-cc-pVTZ calculations have been performed to investigate the complexes of CO2 with the azoles pyrrole, pyrazole, imidazole, 1,2,3- and 1,2,4-triazole, tetrazole and pentazole. Three types of complexes have been found on the CO2:azole potential surfaces. These include ten complexes stabilized by tetrel bonds that have the azole molecule in the symmetry plane of the complex; seven tetrel-bonded complexes in which the CO2 molecule is perpendicular to the symmetry plane; and four hydrogen-bonded complexes. Eight of the planar complexes are stabilized by Nx···C tetrel bonds and by a secondary interaction involving an adjacent Ny-H bond and an O atom of CO2. The seven perpendicular CO2:azole complexes form between CO2 and two adjacent N atoms of the ring, both of which are electron-pair donors. In three of the four hydrogen-bonded complexes, the proton-donor Nz-H bond of the ring is bonded to two C-H bonds, thereby precluding the planar and perpendicular complexes. The fourth hydrogen-bonded complex forms with the strongest acid pentazole. Binding energies, charge-transfer energies and changes in CO2 stretching and bending frequencies upon complex formation provide consistent descriptions of these complexes. Coupling constants across tetrel bonds are negligibly small, but 2hJ(Ny-C) across Nz-H···C hydrogen bonds are larger and increase as the number of N atoms in the ring increases.

Highlights

  • Carbonic anhydrases belong to a family of enzymes that catalyze the reversible reaction that converts carbon dioxide and water to bicarbonate ion and a proton [1,2]

  • We report the structures of these complexes, their binding energies and charge-transfer energies, selected IR stretching and bending frequencies and changes in these frequencies upon complexation, as well as spin-spin coupling constants across tetrel and hydrogen bonds

  • CO2 :azole surfaces, namely tetrel-bonded complexes in which the CO2 molecule lies in the symmetry plane of the complex; tetrel-bonded complexes in which the CO2 molecule is perpendicular to the symmetry plane; and hydrogen-bonded complexes

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Summary

Introduction

Carbonic anhydrases belong to a family of enzymes that catalyze the reversible reaction that converts carbon dioxide and water to bicarbonate ion and a proton [1,2]. The proposed mechanism of action involves hydrogen-bond formation between the threonine N-H (Thr199) and a CO2 oxygen atom [3,4,5,6,7,8,9,10,11]. It is known than azoles are good inhibitors of carbonic anhydrase [1,5,8,12,13,14]. The interaction of CO2 with azoles is important in carbon dioxide capture by metal-organic frameworks [17,18,19,20], zeolitic tetrazolate frameworks [21] and microporous organic polymers [22,23]

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