Complete Genome Sequences of Four Microbacterium Strains Isolated from Metal- and Radionuclide-Rich Soils.

Steven R Gill,Philippe Ortet,Béatrice Alpha-Bazin,Jean Armengaud,Nicolas Gallois,Catherine Berthomieu,Virginie Chapon,Mohamed Barakat,Justine Long,Séverine Zirah

doi:10.1128/mra.00846-19

Abstract

Here, we present the genome sequences of four Microbacterium strains, which were isolated at different locations in Europe from metal- or radionuclide-rich soils. High-quality complete genome sequences were obtained with PacBio and Illumina data sets with an original two-step procedure.

Highlights

We present the genome sequences of four Microbacterium strains, which were isolated at different locations in Europe from metal- or radionuclide-rich soils
Genome de novo assembly was performed on the PacBio reads using Canu software version 1.0 with default parameters [14]
Taxonomic assignment at the species level was provided by the NCBI using their quality control test for bacterial genomes

Summary

Introduction

We present the genome sequences of four Microbacterium strains, which were isolated at different locations in Europe from metal- or radionuclide-rich soils. (Illumina) No of reads (Illumina) Raw data accession no. (PacBio) No of reads (PacBio) Mean read length (bp) (PacBio) Genome length (Mb) GϩC content (%) No of protein-coding genes No of tRNA genes No of rRNA genes No of TCSs No of TFs

Results

Conclusion