Abstract
Pediococcus pentosaceus strain GDIAS 001 was isolated from a tapioca sample in Guangzou, China. The genome of GDIAS 001 was assembled using single-molecule real-time (SMRT) sequencing, and it contains 1 chromosome of 1.83 Mbp and 1,835 protein-coding genes, 71 RNA genes, and 56 tRNA genes.
Highlights
Pediococcus pentosaceus strain GDIAS 001 was isolated from a tapioca sample in Guangzou, China
(http://www.mgc.ac.cn/VFs) (15) was used to detect virulence factors, and 266 putative virulence factors were found in the genome of GDIAS 001
The genomic sequence of GDAIS 001 was annotated by the NCBI PGAP (18) and deposited in the GenBank database
Summary
Pediococcus pentosaceus strain GDIAS 001 was isolated from a tapioca sample in Guangzou, China. A total of 1.46 Gb of SMRT sequencing data (subreads) were obtained. These data were self-corrected, and preliminary assembly was done using Falcon v0.3ϩ with default settings (default parameters were used for all software unless otherwise specified) (8). The consensus sequence was corrected using Genomic Consensus software v2.3.3 and Spira v0.9.9.23.
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