Comparing the population density, colony diversity, and phosphate solubilization ability between rice root endophytic and rice rhizospheric soil bacteria from organic wetland

Abstract

Abstract Phosphate-solubilizing bacteria (PSB) play important roles in the agricultural systems. The present study aims to compare the population density, colony diversity, and phosphate solubilization ability between rice root endophytic bacteria (RRoEB) and rice rhizospheric soil bacteria (RRzSB) from organic wetland. By spread plate method, bacteria were isolated directly using Pikovskaya’s agar and indirectly through other media, namely Nutrient Agar (NA), Starch Casein Agar (SCA), Jensen, and Yeast Extract Mannitol Agar (YEMA). Each distinct colony based on the morphology on the respective media was screened for phosphate solubilization ability by subculturing on Pikovskaya’s agar. The phosphate solubilizing index (PSI) was measured from the halo zone formation. The results showed that by direct isolation, 6 RRoEB and 5 RRzSB were able to phosphate solubilization. By indirect isolation from NA, SCA, Jensen, and YEMA, 2, 3, 1, and 3 isolates of RRoEB and 4, 3, 1, and 3 isolates of RRzSB showed the capability as phosphate solubilizer. Although the highest colony diversity of PSB was obtained from direct isolation, however the highest PSI was yielded from indirect isolation, namely isolates J1R1 (3.53) and Y1S1 (2.48). The highest PSI from direct isolation was obtained by P1R5 (1.90) and P1S1 (1.51).