Abstract

The genome sequences of enterohaemorrhagic E. coli O157:H7 strains show multiple open-reading frames with collagen-like sequences that are absent from the common laboratory strain K-12. These putative collagens are included in prophages embedded in O157:H7 genomes. These prophages carry numerous genes related to strain virulence and have been shown to be inducible and capable of disseminating virulence factors by horizontal gene transfer. We have cloned two collagen-like proteins from E. coli O157:H7 into a laboratory strain and analysed the structure and conformation of the recombinant proteins and several of their constituting domains by a variety of spectroscopic, biophysical, and electron microscopy techniques. We show that these molecules exhibit many of the characteristics of vertebrate collagens, including trimer formation and the presence of a collagen triple helical domain. They also contain a C-terminal trimerization domain, and a trimeric α-helical coiled-coil domain with an unusual amino acid sequence almost completely lacking leucine, valine or isoleucine residues. Intriguingly, these molecules show high thermal stability, with the collagen domain being more stable than those of vertebrate fibrillar collagens, which are much longer and post-translationally modified. Under the electron microscope, collagen-like proteins from E. coli O157:H7 show a dumbbell shape, with two globular domains joined by a hinged stalk. This morphology is consistent with their likely role as trimeric phage side-tail proteins that participate in the attachment of phage particles to E. coli target cells, either directly or through assembly with other phage tail proteins. Thus, collagen-like proteins in enterohaemorrhagic E. coli genomes may have a direct role in the dissemination of virulence-related genes through infection of harmless strains by induced bacteriophages.

Highlights

  • Enterohaemorrhagic E. coli (EHEC) is responsible for gastrointestinal disorders in humans that range from abdominal pain and diarrhoea to haemorrhagic colitis and haemolytic uremic syndrome [1,2,3]

  • That extra genetic material is the result of horizontal gene transfer (HGT) probably mediated by bacteriophages: the Sakai strain genome includes 18 prophages and 6 prophage-like elements integrated into different sites of the bacterial chromosome [5,6], while the EDL933 genome contains 18 prophages and prophagelike elements [4]

  • Several open reading frames potentially encoding collagen-like proteins have been identified by automatic sequence annotation in the genomes of EHEC strains

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Summary

Introduction

Enterohaemorrhagic E. coli (EHEC) is responsible for gastrointestinal disorders in humans that range from abdominal pain and diarrhoea to haemorrhagic colitis and haemolytic uremic syndrome [1,2,3]. The genomes of the E. coli O157:H7 strains EDL933 and Sakai are 0.9 Mb larger than that of the non-pathogenic laboratory E. coli strain K-12 [4,5]. That extra genetic material is the result of horizontal gene transfer (HGT) probably mediated by bacteriophages: the Sakai strain genome includes 18 prophages and 6 prophage-like elements integrated into different sites of the bacterial chromosome [5,6], while the EDL933 genome contains 18 prophages and prophagelike elements [4]. EHEC strains are considered new pathogens that have emerged from less virulent strains by progressive acquisition of virulence factors via HGT. The acquired specific virulent attributes allow EHEC strains to adapt to new niches and to broaden the spectrum of disease

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