Abstract

Neuronal granules are biomolecular condensates that concentrate high quantities of RNAs and RNA-related proteins within neurons. These dense packets of information are trafficked from the soma to distal sites rich in polysomes, where local protein synthesis can occur. Movement of neuronal granules to distal sites, and local protein synthesis, play a critical role in synaptic plasticity. The formation of neuronal granules is intriguing; these granules lack a membrane and instead phase separate due to protein and RNA interactions. Low complexity motifs and RNA binding domains are highly prevalent in these proteins. Here, we introduce the role that coiled-coil motifs play in neuronal granule proteins, and investigate the structure-function relationship of coiled-coil proteins in RNA regulation. Interestingly, low complexity domains and coiled-coil motifs are highly dynamic, allowing for increased functional response to environmental influences. Finally, biomolecular condensates have been suggested to drive the formation of toxic, neurodegenerative proteins such as TDP-43 and tau. Here, we review the conversion of coiled-coil motifs to amyloid structures, and speculate a role that neuronal granules play in coiled-coil to amyloid conversions of neurodegenerative proteins.

Highlights

  • Coiled-coil motifs are abundant in RNA-binding proteins (RBP)

  • Many coiled-coil enriched RBPs are localized to liquid-liquid phase separated (LLPS) neuronal granules, a compartmentalization that is critical for appropriate RNA trafficking in local protein synthesis

  • We identify a high abundance of coiledcoil motifs within RBPs and discern over-representation of these motifs based on the specific RNA-binding domains present

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Summary

INTRODUCTION

Coiled-coil motifs are abundant in RNA-binding proteins (RBP). These proteins play physiological roles in the synaptic plasticity of neurobiology. While Staufen remains within its neuronal granule after stimulation, the non-canonical coiled-coil protein Caprin-1 leaves the neuronal granule when localized to the dendritic ribosome after BDNF stimulation, allowing for translation of its mRNA targets under specific physiological conditions (Shiina et al, 2005) It appears that the coiled-coil motif in Caprin-1 is both necessary for neuronal granule formation, and is sufficient for its major RNA-binding ability (Shiina et al, 2005; Figures 2A,C). The consequences on synaptic plasticity, and learning and memory spine morphology of this mouse model is predicated to be a (Klann and Dever, 2004) Within both neuronal P bodies and FMRP-containing neuronal granules, αCamKII is bound and trafficked via the cytoplasmic polyadenylation element (CPE) in its 3’ untranslated region (UTR) by the RBP cytoplasmic polyadenylation element binding protein 1 and 3 (CPEB1, CPEB3) (Huang et al, 2003; Ford et al, 2019, 2020). It is critical to validate these speculations under physiological conditions, and to carefully consider differences in modifications across proteins

DISCUSSION
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