Abstract

Parameter estimation problems of mathematical models can often be formulated as nonlinear least squares problems. Typically these problems are solved numerically using iterative methods. The local minimiser obtained using these iterative methods usually depends on the choice of the initial iterate. Thus, the estimated parameter and subsequent analyses using it depend on the choice of the initial iterate. One way to reduce the analysis bias due to the choice of the initial iterate is to repeat the algorithm from multiple initial iterates (i.e. use a multi-start method). However, the procedure can be computationally intensive and is not always used in practice. To overcome this problem, we propose the Cluster Gauss–Newton (CGN) method, an efficient algorithm for finding multiple approximate minimisers of nonlinear-least squares problems. CGN simultaneously solves the nonlinear least squares problem from multiple initial iterates. Then, CGN iteratively improves the approximations from these initial iterates similarly to the Gauss–Newton method. However, it uses a global linear approximation instead of the Jacobian. The global linear approximations are computed collectively among all the iterates to minimise the computational cost associated with the evaluation of the mathematical model. We use physiologically based pharmacokinetic (PBPK) models used in pharmaceutical drug development to demonstrate its use and show that CGN is computationally more efficient and more robust against local minima compared to the standard Levenberg–Marquardt method, as well as state-of-the art multi-start and derivative-free methods.

Highlights

  • The parameter estimation of mathematical models often boils down to solving nonlinear least squares problems

  • 5 Concluding remarks We proposed the Cluster Gauss–Newton (CGN) method, a new derivative free method designed for finding multiple approximate minimisers of a nonlinear least squares problem

  • The development of this algorithm was motivated by the parameter estimation of physiologically based pharmacokinetic

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Summary

Introduction

The parameter estimation of mathematical models often boils down to solving nonlinear least squares problems. Algorithms for solving nonlinear least squares problems are widely used in many scientific fields. The most traditional least squares solver is the Gauss–Newton method (Gauss 1857; Björck 1996). Derivativefree methods, which do not explicitly use derivative information of the nonlinear function, have been developed. These methods are usually computationally more efficient as it avoids the costly computation of the derivatives of the nonlinear functions. They can be applied even to problems where the mathematical models are ‘black box’. A comprehensive review of the derivative-free methods can be found in Larson et al (2019)

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