Abstract

The enzyme dihydrodipicolinate reductase (DHDPR) is a component of the lysine biosynthetic pathway in bacteria and higher plants. DHDPR catalyzes the NAD(P)H dependent reduction of 2,3-dihydrodipicolinate to the cyclic imine L-2,3,4,5,-tetrahydropicolinic acid. The dapB gene that encodes dihydrodipicolinate reductase has previously been cloned, but the expression of the enzyme is low and the purification is time consuming. Therefore the E. coli dapB gene was cloned into the pET16b vector to improve the protein expression and simplify the purification. The dapB gene sequence was utilized to design forward and reverse oligonucleotide primers that were used to PCR the gene from Escherichia coli genomic DNA. The primers were designed with NdeI or BamHI restriction sites on the 5’and 3’ terminus respectively. The PCR product was sequenced to confirm the identity of dapB. The gene was cloned into the expression vector pET16b through NdeI and BamHI restriction endonuclease sites. The resulting plasmid containing dapB was transformed into the bacterial strain BL21 (DE3). The transformed cells were utilized to grow and express the histidine-tagged reductase and the protein was purified using Ni-NTA affinity chromatography. SDS/PAGE gel analysis has shown that the protein was 95% pure and has approximate subunit molecular weight of 28 kDa. The protein purification is completed in one day and 3 liters of culture produced approximately 40–50 mgs of protein, an improvement on the previous protein expression and multistep purification.

Highlights

  • Dihydrodipicolinate reductase (DHDPR) was isolated from E. coli in 1965 by Farkas and Gilvarg [1], since the enzyme from several different species has been isolated and characterized [2,3,4,5,6,7,8,9]

  • In this paper we report the cloning of the E. coli dapB gene into the pET-16b plasmid vector next to the six His-tag sequence and transformed into the E. coli strain BL21 (DE3), that is ideal for protein expression [16, 17]

  • Oligonucleotides for the cloning of the reductase gene were synthesized by Invitrogen Laboratory

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Summary

Introduction

Dihydrodipicolinate reductase (DHDPR) was isolated from E. coli in 1965 by Farkas and Gilvarg [1], since the enzyme from several different species has been isolated and characterized [2,3,4,5,6,7,8,9]. E. coli DHDPR gene (dapB) encodes a polypeptide of 273 amino acid residues. The dapB gene from M. tuberculosis was cloned into the plasmid vector pET22b and transformed into an E. coli strain in order to characterize and study the structure of M. tuberculosis DHDPR [13].

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