Abstract

BackgroundClinical outcomes of anaplastic lymphoma kinase (ALK)-rearranged non-small cell lung cancer according to ALK fusion variants are not clear. We aimed to investigate the prevalence of ALK fusion variants and to compare clinical outcomes according to ALK fusion variants.MethodsA retrospective analysis was conducted on patients with advanced ALK-rearranged adenocarcinoma treated with chemotherapy and ALK inhibitors. ALK rearrangement was identified by fluorescence in situ hybridization and confirmed by immunohistochemistry. Peptide nucleic acid-mediated quantitative polymerase chain reaction assays, designed to detect 28 types of echinoderm microtubule-associated protein-like 4 (EML)-ALK rearrangements, were performed. Clinicopathological analysis and treatment outcomes with platinum-based chemotherapy, pemetrexed therapy, and ALK inhibitors—including crizotinib and ceritinib—were evaluated.ResultsA total of 52 patients with ALK-rearranged lung adenocarcinoma were enrolled. EML4-ALK variant 1 (v1) was the most common variant (38.5 %) followed by the non-EML4 variant (36.5 %), EML4-ALK variant 3a/b (19.2 %), and EML4-ALK variant 2 (5.8 %). No clinicopathological distinction was found between the different ALK fusion variants. Treatment response rates for each therapeutic agent did not differ according to ALK fusion variant. However, EML4 variants, especially v1, showed significantly longer progression-free survival (PFS) on pemetrexed treatment than did non-EML4 variants (median 31.1 months versus 5.7 months, P = 0.003). PFS with platinum-based chemotherapy and ALK inhibitors did not differ according to ALK fusion variant. Multivariate survival analysis using Cox’s regression model revealed v1 as the only predictive factor for prolonged PFS on pemetrexed.ConclusionsAmong ALK fusion variants, v1 is the most common subtype. It showed superior progression-free survival on pemetrexed than did non-EML4 variants. No survival difference was demonstrated between variants treated with crizotinib or ceritinib.Electronic supplementary materialThe online version of this article (doi:10.1186/s12967-016-1061-z) contains supplementary material, which is available to authorized users.

Highlights

  • Clinical outcomes of anaplastic lymphoma kinase (ALK)-rearranged non-small cell lung cancer according to ALK fusion variants are not clear

  • We investigated the prevalence of ALK fusion partners in non-small cell lung cancer (NSCLC), and explored whether the efficacy of therapeutic agents differs according to ALK fusion variant

  • Since fluorescence in situ hybridization (FISH) was used as the gold standard method for enrollment in clinical trials of ALK inhibitors, information on ALK fusion variants was limited in previous studies, and the efficacy of chemotherapy or targeted therapy according to fusion variant was not established

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Summary

Introduction

Clinical outcomes of anaplastic lymphoma kinase (ALK)-rearranged non-small cell lung cancer according to ALK fusion variants are not clear. We aimed to investigate the prevalence of ALK fusion variants and to compare clinical outcomes according to ALK fusion variants. Anaplastic lymphoma kinase (ALK) rearrangements, found in approximately 5 % of non-small cell lung cancers (NSCLCs), are relatively rare genetic alterations compared with epidermal growth factor receptor (EGFR). FISH and IHC cannot specify the different variants or fusion gene partners of the ALK gene, which can be identified by real time-polymerase chain reaction (RT-PCR) or next-generation sequencing technology. We investigated the prevalence of ALK fusion partners in NSCLCs, and explored whether the efficacy of therapeutic agents differs according to ALK fusion variant

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