Abstract

Genotype 3 (GT3) is responsible for most European autochthonous hepatitis E virus (HEV) infections. This study analyzed circulating genotypes and GT3 subtypes in the Lazio region, Italy, between 2011 and 2019, as well as their pathogenic characteristics. Of the 64 evaluable HEV GT3 patient-derived sequences, identified subtypes included GT3f (n = 36), GT3e (n = 15), GT3c (n = 9), GT3a (n = 1) and three unsubtyped GT3 sequences. GT3c strains were similar to Dutch sequences (96.8–98.1% identity), GT3e strains showed high similarity (96.8%) with a United Kingdom sequence, while the most related sequences to GT3f Italian strains were isolated in France, Belgium and Japan. One sequence was closely related to another Italian strain isolated in raw sewage in 2016. The liver functioning test median values for 56 evaluable GT3 patients were: alanine aminotransferase (ALT), 461 (range 52–4835 U/L); aspartate aminotransferase (AST), 659 (range 64–6588 U/L); and total bilirubin, 3.49 (range 0.4–33 mg/dL). The median HEV RNA viral load for 26 evaluable GT3 patients was 42,240 IU/mL (range 5680–895,490 IU/mL). Of the 37 GT3 patients with available clinical information, no correlation was observed between HEV clinical manifestations and GT3 subtype. HEV symptoms were comparable among GT3c/e/f patients across most analyzed categories except for epigastric pain, which occurred more frequently in patients with HEV GT3e (75%) than in patients with GT3c (50%) or GT3f (19%) (p = 0.01). Additionally, patients with HEV GT3c exhibited significantly higher median international normalized ratio (INR) than patients with GT3e and GT3f (p = 0.033). The severity of GT3 acute hepatitis E was not linked to HEV RNA viral load or to the GT3 subtype.

Highlights

  • Hepatitis E virus (HEV) is a non-enveloped, single-stranded, positive-sense RNA virus that is a member of the genus Orthohepevirus in the family Hepeviridae

  • The occurrence of acute HEV Genotype 3 (GT3) infections was surveyed in the Lazio region of

  • The influence of GT3 subtypes and genetic variability of viral strains on the course and severity of clinical manifestations was evaluated in HEV

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Summary

Introduction

Hepatitis E virus (HEV) is a non-enveloped, single-stranded, positive-sense RNA virus that is a member of the genus Orthohepevirus in the family Hepeviridae. There are currently five identified species (A–E) of Orthohepevirus, with species A having eight assigned genotypes (GTs), six of which (GT1–4, GT7 and GT8) can infect humans [1]. Genotypes 1 and 2 only infect humans and are endemic. Pathogens 2020, 9, 832 in low-income countries including Asia (GT1), Africa (GT1 and GT2) and South America (GT2). The other genotypes are transmitted zoonotically from animal reservoirs to humans mainly through contaminated food. GT3 has been detected worldwide in both domestic mammals such as pigs, rabbits and sheep and wild mammals including wild boar and deer [2,3]. GT4 has been detected in similar human and mammalian reservoirs to GT3, but is found mainly in Southeast Asia and India with only sporadic autochthonous cases being described in Europe [4,5]. Genotypes 7 and 8 have been detected in the Middle East [6,7]

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