Abstract

BackgroundSomatic mutations or post-translational modifications of proteins result in changes that enable immune recognition. One such post-translational modification is citrullination, the conversion of arginine residues to citrulline. Citrullinated peptides are presented on MHC class II (MHCII) via autophagy which is upregulated by cellular stresses such as tumourigenesis.MethodsPeptides were eluted from B16 melanoma expressing HLA-DP4 and analysed by mass spectrometry to profile the presented citrullinated repertoire. Initially, seven of the identified citrullinated peptides were used in combination to vaccinate HLA-DP4 transgenic mice. Immune responses were characterised from the combination and individual vaccines by ex vivo cytokine ELISpot assay and assessed for tumour therapy.ResultsThe combination vaccine induced only weak anti-tumour therapy in the B16cDP4 melanoma model. Immune phenotyping revealed a dominant IFNγ response to citrullinated matrix metalloproteinase-21 peptide (citMMP21) and an IL-10 response to cytochrome p450 peptide (citCp450). Exclusion of the IL-10 inducing citCp450 peptide from the combined vaccine failed to recover a strong anti-tumour response. Single peptide immunisation confirmed the IFNγ response from citMMP21 and the IL-10 response from citCp450 but also showed that citrullinated Glutamate receptor ionotropic (citGRI) peptide stimulated a low avidity IFNγ response. Interestingly, both citMMP21 and citGRI peptides individually, stimulated strong anti-tumour responses that were significantly better than the combined vaccine. In line with the citGRI T cell avidity, it required high dose immunisation to induce an anti-tumour response. This suggests that as the peptides within the combined vaccine had similar binding affinities to MHC-II the combination vaccine may have resulted in lower presentation of each epitope and weak anti-tumour immunity.ConclusionWe demonstrate that tumours present citrullinated peptides that can stimulate Th1 and regulatory responses and that competition likely exists between similar affinity peptides. Characterisation of responses from epitopes identified by peptide elution are necessary to optimise selection for tumour therapy.

Highlights

  • Progress made in immune-oncology has demonstrated a role for the immune system in the surveillance of cancer [1]

  • The presentation of citrullinated peptides has been shown for several MHC class II (MHCII) alleles and we have previously shown the presentation through HLADP4 allele [20]

  • Despite the citrullinated versions being eluted from HLADP4 on tumour cells, analysis of all native sequences showed a range of predicted binding scores using the Immune Epitope Database (IEDB) predictions software for binding to Human leukocyte antigen (HLA)-DP4 (Supplementary Table 4)

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Summary

Introduction

Progress made in immune-oncology has demonstrated a role for the immune system in the surveillance of cancer [1]. This has focussed in part on the identification and targeting of somatic mutations that form neoantigens [2, 3]. The identification of mutated neoantigen targets from generation sequencing data involves the use of prediction algorithms for MHC binding but may not take into account whether the epitopes are naturally presented. Prediction algorithms are more robust for MHC class I (MHCI) binding peptides the majority of effort has been focussed upon the identification of T cell responses to CD8 T cell epitopes presented via MHCI alleles. Citrullinated peptides are presented on MHC class II (MHCII) via autophagy which is upregulated by cellular stresses such as tumourigenesis

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