Abstract

Chronic diabetic complications affect multiple organs causing widespread organ damage. Although there are some commonalities, the phenotype of such changes show tissue specific variation. Given this, we examined whether differences in circular RNA (circRNA) mediated gene regulatory mechanisms contribute to changes in gene expression at the basal level and in diabetes. CircRNAs are single-stranded RNA with covalently closed loop structures and act as miRNA sponges, factors of RNA splicing, scaffolding for proteins, regulators of transcription, and modulators of the expression of parental genes, among other roles. We examined heart and retinal tissue from Streptozotocin-induced diabetic mice with established diabetes related tissue damage and tissue from non-diabetic controls. A custom array analysis was performed and the data were analysed. Two major circRNA mediated processes were uniquely upregulated in diabetic heart tissue, namely, positive regulation of endothelial cell migration and regulation of mitochondria: mitochondrial electron transport. In the retina, circRNAs regulating extracellular matrix protein production and endothelial to mesenchymal transition (EndMT) were found to be upregulated. The current study identified regulatory and potential pathogenetic roles of specific circRNA in diabetic retinopathy and cardiomyopathy. Understanding such novel mechanisms, may in the future, be useful to develop RNA based treatment strategies.

Highlights

  • Chronic diabetic complications affect multiple organs causing widespread organ damage

  • We have demonstrated qualitative and quantitative differences in circular RNA (circRNA) expression in two tissues affected in chronic diabetic complications

  • The Arraystar circRNA used in this study provides unambiguous and reliable circular junction-specific array probes of high sensitivity and specificity

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Summary

Introduction

Chronic diabetic complications affect multiple organs causing widespread organ damage. CircRNAs are single-stranded RNA with covalently closed loop structures and act as miRNA sponges, factors of RNA splicing, scaffolding for proteins, regulators of transcription, and modulators of the expression of parental genes, among other roles. The current study identified regulatory and potential pathogenetic roles of specific circRNA in diabetic retinopathy and cardiomyopathy Understanding such novel mechanisms, may in the future, be useful to develop RNA based treatment strategies. We have identified that a concerted effort of multiple transcription factors, transcription co-activators and microRNAs/long non-coding RNAs regulate specific vasoactive molecules and ECM proteins in the context of diabetic c­ omplications[8,9,10,11]. Several circRNAs have been functionally studied in the context of cardiometabolic d­ isease[20], The ubiquity of circRNA and their specific regulation could significantly alter our perspective on post-transcriptional regulation and the roles that RNA can play in the cell, making circRNAs a promising candidate for diagnostic modalities and therapies

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