Abstract

Leukaemic stem cell (LSC) persistence remains a major obstacle to curing chronic myeloid leukaemia (CML). The bone morphogenic protein (BMP) pathway is deregulated in CML, with altered expression and response to the BMP ligands shown to impact on LSC expansion and behaviour. In this study, we determined whether alterations in the BMP pathway gene signature had any predictive value for therapeutic response by profiling 60 CML samples at diagnosis from the UK SPIRIT2 trial and correlating the data to treatment response using the 18-month follow-up data. There was significant deregulation of several genes involved in the BMP pathway with ACV1C, INHBA, SMAD7, SNAIL1 and SMURF2 showing differential expression in relation to response. Therapeutic targeting of CML cells using BMP receptor inhibitors, in combination with tyrosine kinase inhibitor (TKI), indicate a synergistic mode of action. Furthermore, dual treatment resulted in altered cell cycle gene transcription and irreversible cell cycle arrest, along with increased apoptosis compared to single agents. Targeting CML CD34+ cells with BMP receptor inhibitors resulted in fewer cell divisions, reduced numbers of CD34+ cells and colony formation when compared to normal donor CD34+ cells, both in the presence and absence of BMP4. In an induced pluripotent stem cell (iPSC) model generated from CD34+ hematopoietic cells, we demonstrate altered cell cycle profiles and dynamics of ALK expression in CML-iPSCs in the presence and absence of BMP4 stimulation, when compared to normal iPSC. Moreover, dual targeting with TKI and BMP inhibitor prevented the self-renewal of CML-iPSC and increased meso-endodermal differentiation. These findings indicate that transformed stem cells may be more reliant on BMP signalling than normal stem cells. These changes offer a therapeutic window in CML, with intervention using BMP inhibitors in combination with TKI having the potential to target LSC self-renewal and improve long-term outcome for patients.

Highlights

  • Chronic myeloid leukaemia (CML) treatment involves targeting BCR-ABL to prevent its tyrosine kinase activity

  • Supporting our published microarray data[17], which confirms that the bone morphogenic protein (BMP) pathway and downstream signalling molecules are significantly deregulated in chronic phase (CP), accelerated phase (AP) and blast crisis (BC) CML in both primitive leukaemic stem cell (LSC) and progenitor subpopulations. These findings suggest CML LSCs may change their reliance/response to the BMP/TGFβ superfamily, especially as the disease progresses from CP to AP/BC17

  • INHBA was the only gene upregulated in both the CD34+ and MNC intermediate/poor responders, this correlates with our previous data, indicating that INHBA is significantly upregulated in BC-CML LSC when compared to CP, and AP LSC, and normal HSC17 (GEO:GSE47927)

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Summary

Introduction

Chronic myeloid leukaemia (CML) treatment involves targeting BCR-ABL to prevent its tyrosine kinase activity. TKIs effectively target progenitor cells, leukaemic stem cell (LSC) are more quiescent and less sensitive to treatment[1,2,3,4,5]. Studies of CML patients on imatinib mesylate (IM) treatment for >4 years indicate BCR-ABL+ cells are retained in the primitive CD34+ CD38− population, even when a deep molecular response is achieved, CML LSC are not eradicated[6,7]. TKI treatment alone is insufficient to cure CML, even when a sustained deep molecular response has been achieved, highlighting different pathophysiology for some patients.

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